FFCP PHASE1:Hg19::chr3:11079240..11079242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6529 | |EntrezGene=6529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11042 | |HGNC=11042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=299bp_to_AK090958_5end | |association_with_transcript=299bp_to_AK090958_5end | ||
|cluster_id=chr3:11079240..11079242,+ | |||
|coexpression_cluster_id=C4263 | |coexpression_cluster_id=C4263 | ||
|description=CAGE_peak_6_at_SLC6A1_5end | |description=CAGE_peak_6_at_SLC6A1_5end | ||
|id=chr3:11079240..11079242,+ | |id=chr3:11079240..11079242,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.53e-58!57;UBERON:0005068!4.53e-58!57;UBERON:0006241!4.53e-58!57;UBERON:0007135!4.53e-58!57;UBERON:0002616!5.57e-56!59;UBERON:0000955!1.01e-50!69;UBERON:0006238!1.01e-50!69;UBERON:0002780!2.68e-50!41;UBERON:0001890!2.68e-50!41;UBERON:0006240!2.68e-50!41;UBERON:0003080!4.86e-49!42;UBERON:0002020!8.28e-49!34;UBERON:0003528!8.28e-49!34;UBERON:0001893!1.12e-48!34;UBERON:0001017!7.35e-46!82;UBERON:0002791!1.76e-44!33;UBERON:0005743!1.49e-43!86;UBERON:0001950!3.69e-41!20;UBERON:0003075!1.32e-40!86;UBERON:0007284!1.32e-40!86;UBERON:0001869!5.11e-40!32;UBERON:0000073!4.64e-39!94;UBERON:0001016!4.64e-39!94;UBERON:0002346!1.31e-38!90;UBERON:0000200!1.74e-37!6;UBERON:0002619!2.20e-37!22;UBERON:0007023!6.32e-35!115;UBERON:0003056!7.94e-33!61;UBERON:0000956!8.26e-33!25;UBERON:0000203!8.26e-33!25;UBERON:0000033!2.94e-29!123;UBERON:0000153!1.08e-27!129;UBERON:0007811!1.08e-27!129;UBERON:0004121!7.30e-20!169;UBERON:0001871!1.15e-19!7;UBERON:0006331!1.29e-19!3;UBERON:0002771!1.29e-19!3;UBERON:0000924!2.69e-19!173;UBERON:0006601!2.69e-19!173;UBERON:0002308!1.48e-17!9;UBERON:0000125!1.48e-17!9;UBERON:0000025!1.84e-15!194;UBERON:0001870!1.54e-13!2;UBERON:0002148!1.54e-13!2;UBERON:0009662!1.54e-13!2;UBERON:0004733!3.63e-13!12;UBERON:0002028!3.63e-13!12;UBERON:0007277!3.63e-13!12;UBERON:0002298!5.19e-13!8;UBERON:0004732!3.88e-12!13;UBERON:0002021!4.01e-12!5;UBERON:0004111!1.70e-11!241;UBERON:0002680!1.74e-11!9;UBERON:0001895!1.74e-11!9;UBERON:0010092!1.74e-11!9;UBERON:0000477!5.52e-11!286;UBERON:0003076!1.72e-10!15;UBERON:0003057!1.72e-10!15;UBERON:0005383!1.53e-09!3;UBERON:0005382!1.53e-09!3;UBERON:0000064!1.86e-09!219;UBERON:0000988!2.53e-09!3;UBERON:0009663!7.67e-09!7;UBERON:0000483!8.27e-09!309;UBERON:0000119!1.12e-08!312;UBERON:0000475!2.79e-08!365;UBERON:0002702!5.22e-08!1;UBERON:0003112!6.37e-08!1;UBERON:0000032!6.37e-08!1;UBERON:0005253!6.37e-08!1;UBERON:0003128!6.37e-08!1;UBERON:0002241!6.37e-08!1;UBERON:0001703!6.37e-08!1;UBERON:0004761!6.37e-08!1;UBERON:0009617!6.37e-08!1;UBERON:0002022!7.26e-08!1;UBERON:0002038!8.28e-08!1;UBERON:0009661!8.28e-08!1;UBERON:0002581!8.84e-08!1;UBERON:0002336!1.22e-07!1;UBERON:0001018!1.22e-07!1;UBERON:0002473!1.22e-07!1;UBERON:0005340!1.22e-07!1;UBERON:0002316!1.22e-07!1;UBERON:0003544!1.22e-07!1;UBERON:0001020!1.22e-07!1;UBERON:0005970!1.22e-07!1;UBERON:0002437!1.22e-07!1;UBERON:0001874!1.39e-07!1;UBERON:0002902!1.48e-07!1;UBERON:0009899!1.48e-07!1;UBERON:0000369!2.32e-07!4;UBERON:0002435!2.32e-07!4;UBERON:0000204!2.32e-07!4;UBERON:0010082!2.32e-07!4;UBERON:0007190!2.63e-07!1;UBERON:0002420!5.70e-07!9;UBERON:0007245!5.70e-07!9;UBERON:0010009!5.70e-07!9;UBERON:0010011!5.70e-07!9;UBERON:0000454!5.70e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!4.53e-58!57;UBERON:0005068!4.53e-58!57;UBERON:0006241!4.53e-58!57;UBERON:0007135!4.53e-58!57;UBERON:0002616!5.57e-56!59;UBERON:0000955!1.01e-50!69;UBERON:0006238!1.01e-50!69;UBERON:0002780!2.68e-50!41;UBERON:0001890!2.68e-50!41;UBERON:0006240!2.68e-50!41;UBERON:0003080!4.86e-49!42;UBERON:0002020!8.28e-49!34;UBERON:0003528!8.28e-49!34;UBERON:0001893!1.12e-48!34;UBERON:0001017!7.35e-46!82;UBERON:0002791!1.76e-44!33;UBERON:0005743!1.49e-43!86;UBERON:0001950!3.69e-41!20;UBERON:0003075!1.32e-40!86;UBERON:0007284!1.32e-40!86;UBERON:0001869!5.11e-40!32;UBERON:0000073!4.64e-39!94;UBERON:0001016!4.64e-39!94;UBERON:0002346!1.31e-38!90;UBERON:0000200!1.74e-37!6;UBERON:0002619!2.20e-37!22;UBERON:0007023!6.32e-35!115;UBERON:0003056!7.94e-33!61;UBERON:0000956!8.26e-33!25;UBERON:0000203!8.26e-33!25;UBERON:0000033!2.94e-29!123;UBERON:0000153!1.08e-27!129;UBERON:0007811!1.08e-27!129;UBERON:0004121!7.30e-20!169;UBERON:0001871!1.15e-19!7;UBERON:0006331!1.29e-19!3;UBERON:0002771!1.29e-19!3;UBERON:0000924!2.69e-19!173;UBERON:0006601!2.69e-19!173;UBERON:0002308!1.48e-17!9;UBERON:0000125!1.48e-17!9;UBERON:0000025!1.84e-15!194;UBERON:0001870!1.54e-13!2;UBERON:0002148!1.54e-13!2;UBERON:0009662!1.54e-13!2;UBERON:0004733!3.63e-13!12;UBERON:0002028!3.63e-13!12;UBERON:0007277!3.63e-13!12;UBERON:0002298!5.19e-13!8;UBERON:0004732!3.88e-12!13;UBERON:0002021!4.01e-12!5;UBERON:0004111!1.70e-11!241;UBERON:0002680!1.74e-11!9;UBERON:0001895!1.74e-11!9;UBERON:0010092!1.74e-11!9;UBERON:0000477!5.52e-11!286;UBERON:0003076!1.72e-10!15;UBERON:0003057!1.72e-10!15;UBERON:0005383!1.53e-09!3;UBERON:0005382!1.53e-09!3;UBERON:0000064!1.86e-09!219;UBERON:0000988!2.53e-09!3;UBERON:0009663!7.67e-09!7;UBERON:0000483!8.27e-09!309;UBERON:0000119!1.12e-08!312;UBERON:0000475!2.79e-08!365;UBERON:0002702!5.22e-08!1;UBERON:0003112!6.37e-08!1;UBERON:0000032!6.37e-08!1;UBERON:0005253!6.37e-08!1;UBERON:0003128!6.37e-08!1;UBERON:0002241!6.37e-08!1;UBERON:0001703!6.37e-08!1;UBERON:0004761!6.37e-08!1;UBERON:0009617!6.37e-08!1;UBERON:0002022!7.26e-08!1;UBERON:0002038!8.28e-08!1;UBERON:0009661!8.28e-08!1;UBERON:0002581!8.84e-08!1;UBERON:0002336!1.22e-07!1;UBERON:0001018!1.22e-07!1;UBERON:0002473!1.22e-07!1;UBERON:0005340!1.22e-07!1;UBERON:0002316!1.22e-07!1;UBERON:0003544!1.22e-07!1;UBERON:0001020!1.22e-07!1;UBERON:0005970!1.22e-07!1;UBERON:0002437!1.22e-07!1;UBERON:0001874!1.39e-07!1;UBERON:0002902!1.48e-07!1;UBERON:0009899!1.48e-07!1;UBERON:0000369!2.32e-07!4;UBERON:0002435!2.32e-07!4;UBERON:0000204!2.32e-07!4;UBERON:0010082!2.32e-07!4;UBERON:0007190!2.63e-07!1;UBERON:0002420!5.70e-07!9;UBERON:0007245!5.70e-07!9;UBERON:0010009!5.70e-07!9;UBERON:0010011!5.70e-07!9;UBERON:0000454!5.70e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.04e-34;2!UBERON:0002021;1.60e-14;5!UBERON:0001950;1.09e-13;20!UBERON:0002619;1.33e-12;22!UBERON:0000200;2.45e-12;6!UBERON:0000956;2.77e-11;25!UBERON:0000203;2.77e-11;25!UBERON:0001871;8.99e-11;6!UBERON:0002791;2.79e-09;32!UBERON:0001869;2.79e-09;32!UBERON:0001893;1.25e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.04e-34,2;UBERON:0002021,1.40e-14,5;UBERON:0001950,1.02e-13,20;UBERON:0002619,1.25e-12,22;UBERON:0000200,2.45e-12,6;UBERON:0000956,2.63e-11,25;UBERON:0000203,2.63e-11,25;UBERON:0001871,8.99e-11,6;UBERON:0002791,3.79e-09,32;UBERON:0001869,3.79e-09,32;UBERON:0003528,1.09e-08,34;UBERON:0002020,1.09e-08,34;UBERON:0001893,1.09e-08,34;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41 | |||
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|short_description=p6@SLC6A1 | |short_description=p6@SLC6A1 | ||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p6@SLC6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A1_5end |
Coexpression cluster: | C4263_occipital_medial_Renal_liver_brain_olfactory_frontal |
Association with transcript: | 299bp_to_AK090958_5end |
EntrezGene: | SLC6A1 |
HGNC: | 11042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.04e-34 | 2 |
occipital lobe | 1.40e-14 | 5 |
neocortex | 1.02e-13 | 20 |
regional part of cerebral cortex | 1.25e-12 | 22 |
gyrus | 2.45e-12 | 6 |
cerebral cortex | 2.63e-11 | 25 |
pallium | 2.63e-11 | 25 |
temporal lobe | 8.99e-11 | 6 |
regional part of telencephalon | 3.79e-09 | 32 |
cerebral hemisphere | 3.79e-09 | 32 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.09e-08 | 34 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |