FFCP PHASE1:Hg19::chr19:2039073..2039085,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:2039073..2039085,-
|short_description=p25@MKNK2
|description=CAGE_peak_25_at_MKNK2_5end
|association_with_transcript=-135bp_to_AL137615_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2872 | |EntrezGene=2872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7111 | |HGNC=7111 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-135bp_to_AL137615_5end | |||
|cluster_id=chr19:2039073..2039085,- | |||
|description=CAGE_peak_25_at_MKNK2_5end | |||
|id=chr19:2039073..2039085,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.44e-09;2!CL:1000500;1.44e-09;2!CL:1000618;1.44e-09;2!CL:1001318;1.44e-09;2!CL:0002173;1.44e-09;2!CL:0002521;6.14e-07;3!CL:0000775;6.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.02e-09,2;CL:1000500,2.02e-09,2;CL:1000618,2.02e-09,2;CL:1001318,2.02e-09,2;CL:0002173,2.02e-09,2;CL:0000775,5.80e-07,3;CL:0002521,6.50e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-10;15!UBERON:0000179;1.65e-10;15!UBERON:0000463;1.65e-10;15!UBERON:0003567;1.44e-09;2!UBERON:0003838;1.44e-09;2!UBERON:0003586;1.44e-09;2!UBERON:0005169;1.44e-09;2!UBERON:0002321;1.44e-09;2!UBERON:0005215;1.44e-09;2!UBERON:0002303;1.44e-09;2!UBERON:0002319;1.44e-09;2!UBERON:0002390;5.01e-08;32!UBERON:0002190;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.60e-10,15;UBERON:0000179,1.60e-10,15;UBERON:0000463,1.60e-10,15;UBERON:0003567,2.02e-09,2;UBERON:0003838,2.02e-09,2;UBERON:0003586,2.02e-09,2;UBERON:0005169,2.02e-09,2;UBERON:0002321,2.02e-09,2;UBERON:0005215,2.02e-09,2;UBERON:0002303,2.02e-09,2;UBERON:0002319,2.02e-09,2;UBERON:0002190,6.50e-07,3 | |||
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| ||
|short_description=p25@MKNK2 | |||
}} | }} |
Latest revision as of 21:14, 16 September 2015
Short description: | p25@MKNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_MKNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_AL137615_5end |
EntrezGene: | MKNK2 |
HGNC: | 7111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.02e-09 | 2 |
kidney interstitial cell | 2.02e-09 | 2 |
juxtaglomerular complex cell | 2.02e-09 | 2 |
renal interstitial pericyte | 2.02e-09 | 2 |
extraglomerular mesangial cell | 2.02e-09 | 2 |
neutrophil | 5.80e-07 | 3 |
subcutaneous fat cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.60e-10 | 15 |
haemolymphatic fluid | 1.60e-10 | 15 |
organism substance | 1.60e-10 | 15 |
abdomen connective tissue | 2.02e-09 | 2 |
abdominal segment connective tissue | 2.02e-09 | 2 |
trunk connective tissue | 2.02e-09 | 2 |
interstitial tissue | 2.02e-09 | 2 |
extraglomerular mesangium | 2.02e-09 | 2 |
kidney interstitium | 2.02e-09 | 2 |
juxtaglomerular apparatus | 2.02e-09 | 2 |
mesangium | 2.02e-09 | 2 |
subcutaneous adipose tissue | 6.50e-07 | 3 |