FFCP PHASE1:Hg19::chr2:56150184..56150209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt=Q12805 | |UniProt=Q12805 | ||
|association_with_transcript=146bp_to_ENST00000394554,uc002rzh.2_5end | |association_with_transcript=146bp_to_ENST00000394554,uc002rzh.2_5end | ||
|cluster_id=chr2:56150184..56150209,- | |||
|coexpression_cluster_id=C395 | |coexpression_cluster_id=C395 | ||
|description=CAGE_peak_6_at_EFEMP1_5end | |description=CAGE_peak_6_at_EFEMP1_5end | ||
|id=chr2:56150184..56150209,- | |id=chr2:56150184..56150209,- | ||
|ontology_enrichment_celltype=CL:0000222!2.20e-11!119;CL:0002139!6.86e-10!24;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:0000136!2.00e-08!15;CL:0000055!8.25e-08!180;CL:0000057!1.87e-07!75;CL:0002494!4.24e-07!16 | |ontology_enrichment_celltype=CL:0000222!2.20e-11!119;CL:0002139!6.86e-10!24;CL:0000213!1.53e-09!57;CL:0000215!1.53e-09!57;CL:0000136!2.00e-08!15;CL:0000055!8.25e-08!180;CL:0000057!1.87e-07!75;CL:0002494!4.24e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.68e-11;13!CL:0002138;6.22e-10;6!CL:0002579;1.29e-08;3!CL:0002615;2.18e-08;3!CL:0002580;2.82e-08;3!CL:0000746;6.19e-08;3!CL:0000153;1.54e-07;9!CL:0000447;1.54e-07;9!CL:0002334;3.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.30e-12,15;CL:0000057,5.85e-11,76;CL:0005020,3.91e-10,6;CL:0002138,3.91e-10,6;CL:0005022,3.91e-10,6;CL:0002579,1.14e-08,3;CL:0002580,1.61e-08,3;CL:0002615,3.72e-08,3;CL:0000746,6.79e-08,3;CL:0000513,6.79e-08,3;CL:0000213,9.16e-08,58;CL:0000215,9.16e-08,58;CL:0000153,1.65e-07,9;CL:0000447,1.65e-07,9;CL:0002334,2.64e-07,12;CL:0000222,4.07e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;6.22e-10;6!CL:0000513;6.19e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.36e-16!69;UBERON:0002049!8.63e-16!79;UBERON:0007798!8.63e-16!79;UBERON:0004872!1.58e-15!84;UBERON:0000477!4.34e-14!286;UBERON:0004535!9.12e-14!110;UBERON:0004111!5.10e-13!241;UBERON:0001981!5.90e-13!60;UBERON:0007500!5.90e-13!60;UBERON:0004537!5.90e-13!60;UBERON:0006965!5.90e-13!60;UBERON:0001009!7.64e-13!113;UBERON:0000025!4.72e-11!194;UBERON:0003914!1.20e-10!118;UBERON:0000483!2.48e-10!309;UBERON:0000119!3.58e-10!312;UBERON:0001637!8.99e-09!42;UBERON:0003509!8.99e-09!42;UBERON:0004572!8.99e-09!42;UBERON:0004573!3.75e-08!33;UBERON:0004571!3.75e-08!33;UBERON:0000475!5.85e-08!365;UBERON:0006914!6.33e-08!25;UBERON:0004457!5.94e-07!12;UBERON:0000042!5.94e-07!12;UBERON:0003688!7.58e-07!6;UBERON:0002358!7.58e-07!6;UBERON:0003684!7.58e-07!6;UBERON:0001178!7.58e-07!6 | |ontology_enrichment_uberon=UBERON:0000055!6.36e-16!69;UBERON:0002049!8.63e-16!79;UBERON:0007798!8.63e-16!79;UBERON:0004872!1.58e-15!84;UBERON:0000477!4.34e-14!286;UBERON:0004535!9.12e-14!110;UBERON:0004111!5.10e-13!241;UBERON:0001981!5.90e-13!60;UBERON:0007500!5.90e-13!60;UBERON:0004537!5.90e-13!60;UBERON:0006965!5.90e-13!60;UBERON:0001009!7.64e-13!113;UBERON:0000025!4.72e-11!194;UBERON:0003914!1.20e-10!118;UBERON:0000483!2.48e-10!309;UBERON:0000119!3.58e-10!312;UBERON:0001637!8.99e-09!42;UBERON:0003509!8.99e-09!42;UBERON:0004572!8.99e-09!42;UBERON:0004573!3.75e-08!33;UBERON:0004571!3.75e-08!33;UBERON:0000475!5.85e-08!365;UBERON:0006914!6.33e-08!25;UBERON:0004457!5.94e-07!12;UBERON:0000042!5.94e-07!12;UBERON:0003688!7.58e-07!6;UBERON:0002358!7.58e-07!6;UBERON:0003684!7.58e-07!6;UBERON:0001178!7.58e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.71e-18;9!UBERON:0000042;7.71e-18;9!UBERON:0003688;2.57e-15;6!UBERON:0002358;2.57e-15;6!UBERON:0003684;2.57e-15;6!UBERON:0001178;2.57e-15;6!UBERON:0001473;2.41e-07;8!UBERON:0004536;2.41e-07;8!UBERON:0006558;2.41e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.88e-15,6;UBERON:0002358,3.88e-15,6;UBERON:0003684,3.88e-15,6;UBERON:0001178,3.88e-15,6;UBERON:0004457,7.71e-13,12;UBERON:0000042,7.71e-13,12;UBERON:0000055,1.01e-09,68;UBERON:0004535,2.64e-09,109;UBERON:0001009,7.11e-09,112;UBERON:0004872,7.28e-09,83;UBERON:0002049,1.03e-08,78;UBERON:0007798,1.03e-08,78;UBERON:0003914,4.70e-08,117;UBERON:0001473,1.72e-07,8;UBERON:0004536,1.72e-07,8;UBERON:0006558,1.72e-07,8 | |||
|phase1_expression=5.63202975738726,0.856402095563933,5.49722175974288,1.0007329835313,5.81049422755474,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0.37129905888014,0,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,1.2786256184353,5.06014813338393,6.01605492763067,5.5041677205113,0.795285947051099,0,0.0945348171640679,1.10864698731282,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.775250277507987,2.13459757612026,2.67776490211736,1.20848795132744,3.04108842287405,0.488124115096339,1.47065232138347,0.81014194788176,0.892997282840798,0.44905874525234,0.675668882899933,1.53316637465883,0,0.549605231791222,0,0,0,0.993943903390637,3.79891534993739,2.64818361626438,8.3182620017156,0.354668382198357,2.80338800071154,0,0.74000264525148,1.24484414159907,0.538842688278752,0.980771418680752,0.454072282934794,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,1.61450672119976,2.34913127700424,0.847727604638247,0.600182192168805,0.618315175430633,0,0.18611685633159,0.675105328965065,0.584622030967192,1.51460264546469,1.93304787148829,1.93975268182574,2.13005755509969,0.201504196455281,0.339121184620975,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0.329250856225877,0,0,0.185176890317059,0,0,2.88662684050547,0.115930404975077,1.17408694235822,1.87676382089396,1.38895653772983,2.85381228351897,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,1.28680194292333,0,0,0,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,2.28767947683888,0.713715955188647,0.788512075169673,1.99140405487612,0.601892199455438,2.27407504055985,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,3.47350930946288,5.52463103837025,1.96462066103151,4.99742682097234,4.09365799253363,2.73451665944133,0,0,0.355123450626254,0.0821271560138091,0,0,0,0.200506470303285,0,0.574072240823034,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0.170093705276516,1.51141141271498,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0.412164046590889,0,0,0,0,4.82051789532479,0,0,0,0,0.214840489736547,0.145016693914229,0,0.178064071293475,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,2.51849877464512,0,0.616067160352178,1.06461206063404,0,0.74129687641568,1.14499909393593,0,0,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0.606547444719948,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0.424216295861138,0,0,2.65375590096488,0.438450885253763,0,1.31178950409327,0.405820753925408,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,6.33322905892992,6.25660296623814,0,0,0.577332676353072,0.670302275535787,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.593929361665277,1.22864280839693,0,0,0.222617410045812,0,0,1.79323189425963,0.276283915531148,0,0.613612095012929,0,0.622079175323615,0,0,0,0.493217028184668,0,0,0,0.556608588971108,0,0,0,0,0.341380344856499,1.27126825146383,0,0,0,0,0,0.120596438625408,0,0,0,0.87754158861589,0,4.74040730547251,0.230850775511391,0.455768223388005,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.539209063845416,0,0.702793337176017,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0.685946781900644,0.0870592065804026,0.52418000472609,0,0,0,0,0.290967049465258,0,1.35588444468319,0.411125773940253,0,0.316553979779393,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0.558564802544508,1.14580212005842,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.242998226632099,0,0.315222829196793,0.104909176269996,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,1.28144895081234,0.628817220398664,0,0.496166021811951,0.197611631897944,0,1.91502377331055,2.1760712134779,1.7548292581589,3.67614692116154,0.655745261419609,0,0,0.122026264901963,0.250381861413,1.14681839138014,0.665574309221114,0.683060432355218,0,0.874862855734746,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0.686520205190771,1.36107831386915,0.310874401165561,0,0.477890301491107,0,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,1.01024846629776,0,0,1.07220795687463,0.260994291965212,0.680117776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| ||
|short_description=p6@EFEMP1 | |short_description=p6@EFEMP1 | ||
}} | }} |
Latest revision as of 18:18, 17 September 2015
Short description: | p6@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EFEMP1_5end |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | 146bp_to_ENST00000394554, uc002rzh.2_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | Q12805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.30e-12 | 15 |
fibroblast | 5.85e-11 | 76 |
lymphangioblast | 3.91e-10 | 6 |
endothelial cell of lymphatic vessel | 3.91e-10 | 6 |
vascular lymphangioblast | 3.91e-10 | 6 |
omentum preadipocyte | 1.14e-08 | 3 |
preadipocyte of the breast | 1.61e-08 | 3 |
adipocyte of omentum tissue | 3.72e-08 | 3 |
cardiac muscle cell | 6.79e-08 | 3 |
cardiac muscle myoblast | 6.79e-08 | 3 |
lining cell | 9.16e-08 | 58 |
barrier cell | 9.16e-08 | 58 |
GAG secreting cell | 1.65e-07 | 9 |
carbohydrate secreting cell | 1.65e-07 | 9 |
preadipocyte | 2.64e-07 | 12 |
mesodermal cell | 4.07e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.88e-15 | 6 |
peritoneum | 3.88e-15 | 6 |
abdominal cavity | 3.88e-15 | 6 |
visceral peritoneum | 3.88e-15 | 6 |
cavity lining | 7.71e-13 | 12 |
serous membrane | 7.71e-13 | 12 |
vessel | 1.01e-09 | 68 |
cardiovascular system | 2.64e-09 | 109 |
circulatory system | 7.11e-09 | 112 |
splanchnic layer of lateral plate mesoderm | 7.28e-09 | 83 |
vasculature | 1.03e-08 | 78 |
vascular system | 1.03e-08 | 78 |
epithelial tube | 4.70e-08 | 117 |
lymphatic vessel | 1.72e-07 | 8 |
lymph vasculature | 1.72e-07 | 8 |
lymphatic part of lymphoid system | 1.72e-07 | 8 |