FFCP PHASE1:Hg19::chr19:18898451..18898462,-: Difference between revisions
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|id=chr19:18898451..18898462,-
|short_description=p@chr19:18898451..18898462,-
|description=CAGE_peak_at_chr19:18898451..18898462,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18898451..18898462,- | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr19:18898451..18898462,- | |||
|id=chr19:18898451..18898462,- | |||
|ontology_enrichment_celltype=CL:0000136!1.84e-26!15;CL:0000153!5.70e-22!9;CL:0000447!5.70e-22!9;CL:0000667!2.72e-17!6;CL:0000058!2.72e-17!6;CL:0000138!2.72e-17!6;CL:0002334!1.23e-16!12;CL:0002580!6.08e-14!3;CL:0000327!9.11e-14!14;CL:0002615!9.69e-14!3;CL:0000499!1.08e-13!27;CL:0000135!1.25e-13!3;CL:0000386!1.25e-13!3;CL:0000388!1.25e-13!3;CL:0002579!3.53e-13!3;CL:0000057!2.31e-10!75;CL:0002617!5.77e-10!2;CL:0000325!6.16e-09!39;CL:0000134!1.76e-07!358;CL:0002320!3.50e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.26e-37;13!CL:0002580;1.93e-24;3!CL:0002615;3.91e-24;3!CL:0000135;7.91e-24;3!CL:0000388;7.91e-24;3!CL:0002334;6.12e-23;12!CL:0000153;3.50e-21;9!CL:0000447;3.50e-21;9!CL:0000138;1.60e-20;6!CL:0002617;4.19e-17;2!CL:0000499;1.67e-16;28!CL:0000327;1.15e-12;15!CL:0002579;3.51e-11;3!CL:0002521;6.99e-11;3!CL:0002581;4.54e-09;1!CL:0002616;7.55e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.14e-40,15;CL:0002580,1.78e-24,3;CL:0002615,4.23e-24,3;CL:0000135,6.77e-24,3;CL:0000388,6.77e-24,3;CL:0002334,6.48e-23,12;CL:0000153,3.15e-21,9;CL:0000447,3.15e-21,9;CL:0000058,1.45e-20,6;CL:0000138,1.45e-20,6;CL:0002617,4.19e-17,2;CL:0000499,1.52e-16,28;CL:0000327,1.08e-12,15;CL:0002579,3.60e-11,3;CL:0002521,7.36e-11,3;CL:0002581,5.31e-09,1;CL:0002616,6.72e-09,1;CL:0000134,1.45e-08,354;CL:0002320,2.56e-08,361;CL:0000219,1.91e-07,386;CL:0000057,6.27e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.73e-25!6;UBERON:0002358!3.73e-25!6;UBERON:0003684!3.73e-25!6;UBERON:0001178!3.73e-25!6;UBERON:0004457!1.79e-21!12;UBERON:0000042!1.79e-21!12;UBERON:0000043!1.25e-13!3;UBERON:0001013!2.15e-13!14;UBERON:0003978!1.20e-12!3;UBERON:0009751!1.20e-12!3;UBERON:0000946!1.20e-12!3;UBERON:0002523!1.20e-12!3;UBERON:0005983!1.20e-12!3;UBERON:0002165!1.20e-12!3;UBERON:0002062!1.20e-12!3;UBERON:0007280!1.20e-12!3;UBERON:0004923!6.02e-11!57;UBERON:0000310!6.56e-11!10;UBERON:0001443!6.97e-10!11;UBERON:0005406!1.82e-09!2;UBERON:0002133!4.33e-09!2;UBERON:0002384!1.99e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.50e-32;6!UBERON:0002358;3.50e-32;6!UBERON:0003684;3.50e-32;6!UBERON:0001178;3.50e-32;6!UBERON:0004457;1.17e-30;9!UBERON:0000042;1.17e-30;9!UBERON:0007846;7.91e-24;3!UBERON:0000043;7.91e-24;3!UBERON:0007845;7.91e-24;3!UBERON:0000310;7.83e-20;10!UBERON:0001443;5.10e-18;11!UBERON:0005406;3.36e-16;2!UBERON:0001013;2.69e-13;14!UBERON:0002190;6.99e-11;3!UBERON:0000989;7.55e-09;1!UBERON:0008811;7.55e-09;1!UBERON:0002134;1.03e-08;1!UBERON:0005208;1.03e-08;1!UBERON:0004145;1.03e-08;1!UBERON:0005946;1.03e-08;1!UBERON:0005965;1.03e-08;1!UBERON:0002078;1.03e-08;1!UBERON:0002072;7.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.86e-32,6;UBERON:0002358,3.86e-32,6;UBERON:0003684,3.86e-32,6;UBERON:0001178,3.86e-32,6;UBERON:0007846,6.77e-24,3;UBERON:0000043,6.77e-24,3;UBERON:0007845,6.77e-24,3;UBERON:0004457,7.00e-23,12;UBERON:0000042,7.00e-23,12;UBERON:0000310,7.54e-20,10;UBERON:0001443,4.93e-18,11;UBERON:0005406,3.49e-16,2;UBERON:0001013,2.91e-13,14;UBERON:0002190,7.36e-11,3;UBERON:0000989,7.85e-09,1;UBERON:0008811,7.85e-09,1;UBERON:0006258,7.85e-09,1;UBERON:0005876,7.85e-09,1;UBERON:0004874,7.85e-09,1;UBERON:0002134,1.07e-08,1;UBERON:0005208,1.07e-08,1;UBERON:0005946,1.07e-08,1;UBERON:0005965,1.07e-08,1;UBERON:0002078,1.07e-08,1;UBERON:0002384,5.57e-08,371;UBERON:0002072,7.40e-07,5 | |||
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| ||
|short_description=p@chr19:18898451..18898462,- | |||
}} | }} |
Latest revision as of 05:21, 26 July 2015
Short description: | p@chr19:18898451..18898462, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18898451..18898462, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.14e-40 | 15 |
preadipocyte of the breast | 1.78e-24 | 3 |
adipocyte of omentum tissue | 4.23e-24 | 3 |
fibrocyte | 6.77e-24 | 3 |
tendon cell | 6.77e-24 | 3 |
preadipocyte | 6.48e-23 | 12 |
GAG secreting cell | 3.15e-21 | 9 |
carbohydrate secreting cell | 3.15e-21 | 9 |
chondroblast | 1.45e-20 | 6 |
chondrocyte | 1.45e-20 | 6 |
adipocyte of breast | 4.19e-17 | 2 |
stromal cell | 1.52e-16 | 28 |
extracellular matrix secreting cell | 1.08e-12 | 15 |
omentum preadipocyte | 3.60e-11 | 3 |
subcutaneous fat cell | 7.36e-11 | 3 |
perirenal preadipocyte | 5.31e-09 | 1 |
perirenal adipocyte cell | 6.72e-09 | 1 |
mesenchymal cell | 1.45e-08 | 354 |
connective tissue cell | 2.56e-08 | 361 |
motile cell | 1.91e-07 | 386 |
fibroblast | 6.27e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.86e-32 | 6 |
peritoneum | 3.86e-32 | 6 |
abdominal cavity | 3.86e-32 | 6 |
visceral peritoneum | 3.86e-32 | 6 |
dense regular connective tissue | 6.77e-24 | 3 |
tendon | 6.77e-24 | 3 |
regular connective tissue | 6.77e-24 | 3 |
cavity lining | 7.00e-23 | 12 |
serous membrane | 7.00e-23 | 12 |
breast | 7.54e-20 | 10 |
chest | 4.93e-18 | 11 |
perirenal fat | 3.49e-16 | 2 |
adipose tissue | 2.91e-13 | 14 |
subcutaneous adipose tissue | 7.36e-11 | 3 |
penis | 7.85e-09 | 1 |
intromittent organ | 7.85e-09 | 1 |
lateral plate mesenchyme | 7.85e-09 | 1 |
undifferentiated genital tubercle | 7.85e-09 | 1 |
somatopleure | 7.85e-09 | 1 |
tricuspid valve | 1.07e-08 | 1 |
right atrium valve | 1.07e-08 | 1 |
outflow tract of atrium | 1.07e-08 | 1 |
outflow part of right atrium | 1.07e-08 | 1 |
right cardiac atrium | 1.07e-08 | 1 |
connective tissue | 5.57e-08 | 371 |
hypodermis | 7.40e-07 | 5 |