FFCP PHASE1:Hg19::chr2:234398623..234398628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55230 | |EntrezGene=55230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20069 | |HGNC=20069 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-108bp_to_ENST00000496298_5end | |association_with_transcript=-108bp_to_ENST00000496298_5end | ||
|cluster_id=chr2:234398623..234398628,- | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_20_at_USP40_5end | |description=CAGE_peak_20_at_USP40_5end | ||
|id=chr2:234398623..234398628,- | |id=chr2:234398623..234398628,- | ||
|ontology_enrichment_celltype=CL:0000319!1.46e-50!1;CL:0000159!4.32e-26!2;CL:0002097!9.18e-26!2;CL:0000174!1.12e-17!3;CL:0000077!1.81e-11!19;CL:0000197!1.44e-09!6;CL:0000098!1.44e-09!6;CL:0002167!1.44e-09!6;CL:0000150!8.85e-07!9;CL:0000163!8.85e-07!9 | |ontology_enrichment_celltype=CL:0000319!1.46e-50!1;CL:0000159!4.32e-26!2;CL:0002097!9.18e-26!2;CL:0000174!1.12e-17!3;CL:0000077!1.81e-11!19;CL:0000197!1.44e-09!6;CL:0000098!1.44e-09!6;CL:0002167!1.44e-09!6;CL:0000150!8.85e-07!9;CL:0000163!8.85e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000319;5.42e-195;1!CL:0000159;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!1.46e-50!1;DOID:170!1.57e-09!6 | |ontology_enrichment_disease=DOID:3030!1.46e-50!1;DOID:170!1.57e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:3030;5.42e-195;1!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.42e-195,1;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0002369!1.12e-17!3;UBERON:0001235!1.12e-17!3;UBERON:0006858!1.12e-17!3 | |ontology_enrichment_uberon=UBERON:0002369!1.12e-17!3;UBERON:0001235!1.12e-17!3;UBERON:0006858!1.12e-17!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p20@USP40 | |short_description=p20@USP40 | ||
}} | }} |
Latest revision as of 23:13, 15 September 2015
Short description: | p20@USP40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_USP40_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -108bp_to_ENST00000496298_5end |
EntrezGene: | USP40 |
HGNC: | 20069 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.42e-195 | 1 |
seromucus secreting cell | 1.55e-98 | 2 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.42e-195 | 1 |
adenocarcinoma | 2.15e-09 | 25 |