FFCP PHASE1:Hg19::chr2:233384889..233384914,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |EntrezGene=646960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |HGNC=39433 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |UniProt=P0CW18 | ||
|association_with_transcript=-258bp_to_NM_001195129_5end | |association_with_transcript=-258bp_to_NM_001195129_5end | ||
|cluster_id=chr2:233384889..233384914,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_1_at_PRSS56_5end | |description=CAGE_peak_1_at_PRSS56_5end | ||
|id=chr2:233384889..233384914,+ | |id=chr2:233384889..233384914,+ | ||
|ontology_enrichment_celltype=CL:0000819!7.10e-08!1 | |ontology_enrichment_celltype=CL:0000819!7.10e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.73e-11;2!CL:0000214;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.73e-11,2;CL:0000214,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.63e-08;10!UBERON:0003056;7.26e-08;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.17e-11!143;DOID:305!2.22e-11!106;DOID:162!1.02e-10!235;DOID:14566!2.11e-10!239;DOID:0060073!7.10e-08!1;DOID:8675!7.10e-08!1 | |ontology_enrichment_disease=DOID:0050687!1.17e-11!143;DOID:305!2.22e-11!106;DOID:162!1.02e-10!235;DOID:14566!2.11e-10!239;DOID:0060073!7.10e-08!1;DOID:8675!7.10e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1325;2.51e-12;7!DOID:3904;2.51e-12;7!DOID:3093;1.47e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,2.66e-12,7;DOID:3904,2.66e-12,7;DOID:3093,1.42e-07,11;DOID:0050686,8.88e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.62e-58!9;UBERON:0001557!5.04e-27!19;UBERON:0008947!2.01e-19!38;UBERON:0003258!2.01e-19!38;UBERON:0000072!1.05e-15!46;UBERON:0001905!1.12e-14!2;UBERON:0002757!1.12e-14!2;UBERON:0010134!1.12e-14!2;UBERON:0002784!1.12e-14!2;UBERON:0005408!1.12e-14!2;UBERON:0001899!1.12e-14!2;UBERON:0000065!2.28e-13!53;UBERON:0000063!1.43e-12!97;UBERON:0001004!2.52e-09!72;UBERON:0003296!9.01e-08!4;UBERON:0010133!9.01e-08!4 | |ontology_enrichment_uberon=UBERON:0001737!1.62e-58!9;UBERON:0001557!5.04e-27!19;UBERON:0008947!2.01e-19!38;UBERON:0003258!2.01e-19!38;UBERON:0000072!1.05e-15!46;UBERON:0001905!1.12e-14!2;UBERON:0002757!1.12e-14!2;UBERON:0010134!1.12e-14!2;UBERON:0002784!1.12e-14!2;UBERON:0005408!1.12e-14!2;UBERON:0001899!1.12e-14!2;UBERON:0000065!2.28e-13!53;UBERON:0000063!1.43e-12!97;UBERON:0001004!2.52e-09!72;UBERON:0003296!9.01e-08!4;UBERON:0010133!9.01e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.02e-11;2!UBERON:0002757;3.02e-11;2!UBERON:0010134;3.02e-11;2!UBERON:0005408;3.02e-11;2!UBERON:0001899;3.02e-11;2!UBERON:0006915;7.26e-08;3!UBERON:0007616;7.26e-08;3!UBERON:0002217;7.26e-08;3!UBERON:0002018;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.02e-11,2;UBERON:0002757,3.02e-11,2;UBERON:0010134,3.02e-11,2;UBERON:0005408,3.02e-11,2;UBERON:0001899,3.02e-11,2;UBERON:0006915,7.26e-08,3;UBERON:0007616,7.26e-08,3;UBERON:0002217,7.26e-08,3;UBERON:0002018,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.295951615229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,1.63407695278485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9769387140681,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22568857213039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21421101526972,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8216317774326,0,0,12.8630404592152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68211655728414,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.709840800239063,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.295951615229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,1.63407695278485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9769387140681,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22568857213039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21421101526972,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,2.68623139945635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8216317774326,0,0,12.8630404592152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68211655728414,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@PRSS56 | |short_description=p1@PRSS56 | ||
}} | }} |
Latest revision as of 21:40, 15 September 2015
Short description: | p1@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRSS56_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -258bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.73e-11 | 2 |
synovial cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.02e-11 | 2 |
regional part of epithalamus | 3.02e-11 | 2 |
secretory circumventricular organ | 3.02e-11 | 2 |
circumventricular organ | 3.02e-11 | 2 |
epithalamus | 3.02e-11 | 2 |
stratified squamous epithelium | 7.26e-08 | 3 |
layer of synovial tissue | 7.26e-08 | 3 |
synovial joint | 7.26e-08 | 3 |
synovial membrane of synovial joint | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 2.66e-12 | 7 |
bronchogenic carcinoma | 2.66e-12 | 7 |
nervous system cancer | 1.42e-07 | 11 |
organ system cancer | 8.88e-07 | 137 |