FFCP PHASE1:Hg19::chr2:224840275..224840339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |EntrezGene=5270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8951 | |HGNC=8951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_AJ293400_5end | |association_with_transcript=42bp_to_AJ293400_5end | ||
|cluster_id=chr2:224840275..224840339,- | |||
|coexpression_cluster_id=C354 | |coexpression_cluster_id=C354 | ||
|description=CAGE_peak_6_at_SERPINE2_5end | |description=CAGE_peak_6_at_SERPINE2_5end | ||
|id=chr2:224840275..224840339,- | |id=chr2:224840275..224840339,- | ||
|ontology_enrichment_celltype=CL:0000055!9.75e-14!180;CL:0000057!1.87e-11!75 | |ontology_enrichment_celltype=CL:0000055!9.75e-14!180;CL:0000057!1.87e-11!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.84e-09;9!CL:0000447;4.84e-09;9!CL:0000138;3.71e-07;6!CL:0000499;7.40e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.87e-09,9;CL:0000447,4.87e-09,9;CL:0000057,8.06e-08,76;CL:0000058,4.00e-07,6;CL:0000138,4.00e-07,6;CL:0000499,7.07e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.34e-12!365;UBERON:0001049!7.29e-12!57;UBERON:0005068!7.29e-12!57;UBERON:0006241!7.29e-12!57;UBERON:0007135!7.29e-12!57;UBERON:0002020!4.68e-10!34;UBERON:0003528!4.68e-10!34;UBERON:0000955!7.12e-10!69;UBERON:0006238!7.12e-10!69;UBERON:0003080!7.79e-10!42;UBERON:0001017!1.31e-09!82;UBERON:0002780!1.73e-09!41;UBERON:0001890!1.73e-09!41;UBERON:0006240!1.73e-09!41;UBERON:0002616!3.56e-09!59;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0001869!1.93e-08!32;UBERON:0005743!2.16e-08!86;UBERON:0001893!2.38e-08!34;UBERON:0002791!2.61e-08!33;UBERON:0002619!7.74e-08!22;UBERON:0000025!2.80e-07!194;UBERON:0004111!3.00e-07!241;UBERON:0000468!7.52e-07!659;UBERON:0003075!7.63e-07!86;UBERON:0007284!7.63e-07!86;UBERON:0002346!8.58e-07!90 | |ontology_enrichment_uberon=UBERON:0000475!6.34e-12!365;UBERON:0001049!7.29e-12!57;UBERON:0005068!7.29e-12!57;UBERON:0006241!7.29e-12!57;UBERON:0007135!7.29e-12!57;UBERON:0002020!4.68e-10!34;UBERON:0003528!4.68e-10!34;UBERON:0000955!7.12e-10!69;UBERON:0006238!7.12e-10!69;UBERON:0003080!7.79e-10!42;UBERON:0001017!1.31e-09!82;UBERON:0002780!1.73e-09!41;UBERON:0001890!1.73e-09!41;UBERON:0006240!1.73e-09!41;UBERON:0002616!3.56e-09!59;UBERON:0000073!1.43e-08!94;UBERON:0001016!1.43e-08!94;UBERON:0001869!1.93e-08!32;UBERON:0005743!2.16e-08!86;UBERON:0001893!2.38e-08!34;UBERON:0002791!2.61e-08!33;UBERON:0002619!7.74e-08!22;UBERON:0000025!2.80e-07!194;UBERON:0004111!3.00e-07!241;UBERON:0000468!7.52e-07!659;UBERON:0003075!7.63e-07!86;UBERON:0007284!7.63e-07!86;UBERON:0002346!8.58e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.81e-09;9!UBERON:0000042;1.81e-09;9!UBERON:0002619;3.04e-08;22!UBERON:0003528;7.12e-08;34!UBERON:0002020;7.12e-08;34!UBERON:0003688;1.29e-07;6!UBERON:0002358;1.29e-07;6!UBERON:0003684;1.29e-07;6!UBERON:0001178;1.29e-07;6!UBERON:0002791;1.96e-07;32!UBERON:0000956;5.76e-07;25!UBERON:0000203;5.76e-07;25!UBERON:0001869;8.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.58e-10,34;UBERON:0002020,6.58e-10,34;UBERON:0001049,9.65e-09,56;UBERON:0005068,9.65e-09,56;UBERON:0006241,9.65e-09,56;UBERON:0007135,9.65e-09,56;UBERON:0000073,1.70e-08,53;UBERON:0002616,1.70e-08,53;UBERON:0002619,3.03e-08,22;UBERON:0002791,5.62e-08,32;UBERON:0000955,1.20e-07,68;UBERON:0006238,1.20e-07,68;UBERON:0002780,1.66e-07,41;UBERON:0001890,1.66e-07,41;UBERON:0003080,1.66e-07,41;UBERON:0006240,1.66e-07,41;UBERON:0003688,1.82e-07,6;UBERON:0002358,1.82e-07,6;UBERON:0003684,1.82e-07,6;UBERON:0001178,1.82e-07,6;UBERON:0001893,2.59e-07,34;UBERON:0000956,5.75e-07,25;UBERON:0000203,5.75e-07,25;UBERON:0001869,6.13e-07,32;UBERON:0001017,6.67e-07,81 | |||
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| ||
|short_description=p6@SERPINE2 | |short_description=p6@SERPINE2 | ||
}} | }} |
Latest revision as of 00:43, 25 September 2015
Short description: | p6@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 42bp_to_AJ293400_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.87e-09 | 9 |
carbohydrate secreting cell | 4.87e-09 | 9 |
fibroblast | 8.06e-08 | 76 |
chondroblast | 4.00e-07 | 6 |
chondrocyte | 4.00e-07 | 6 |
stromal cell | 7.07e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.58e-10 | 34 |
gray matter | 6.58e-10 | 34 |
neural tube | 9.65e-09 | 56 |
neural rod | 9.65e-09 | 56 |
future spinal cord | 9.65e-09 | 56 |
neural keel | 9.65e-09 | 56 |
regional part of nervous system | 1.70e-08 | 53 |
regional part of brain | 1.70e-08 | 53 |
regional part of cerebral cortex | 3.03e-08 | 22 |
regional part of telencephalon | 5.62e-08 | 32 |
brain | 1.20e-07 | 68 |
future brain | 1.20e-07 | 68 |
regional part of forebrain | 1.66e-07 | 41 |
forebrain | 1.66e-07 | 41 |
anterior neural tube | 1.66e-07 | 41 |
future forebrain | 1.66e-07 | 41 |
omentum | 1.82e-07 | 6 |
peritoneum | 1.82e-07 | 6 |
abdominal cavity | 1.82e-07 | 6 |
visceral peritoneum | 1.82e-07 | 6 |
telencephalon | 2.59e-07 | 34 |
cerebral cortex | 5.75e-07 | 25 |
pallium | 5.75e-07 | 25 |
cerebral hemisphere | 6.13e-07 | 32 |
central nervous system | 6.67e-07 | 81 |