FFCP PHASE1:Hg19::chr19:18597484..18597505,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:18597484..18597505,+
|short_description=p@chr19:18597484..18597505,+
|description=CAGE_peak_at_chr19:18597484..18597505,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18597484..18597505,+ | |||
|coexpression_cluster_id=C520 | |||
|description=CAGE_peak_at_chr19:18597484..18597505,+ | |||
|id=chr19:18597484..18597505,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.63e-90!42;CL:0000860!2.79e-83!45;CL:0000766!9.27e-62!76;CL:0002009!3.42e-58!65;CL:0000738!1.73e-57!140;CL:0002194!1.83e-57!63;CL:0000576!1.83e-57!63;CL:0000040!1.83e-57!63;CL:0000559!1.83e-57!63;CL:0000557!2.13e-57!71;CL:0000839!1.27e-55!70;CL:0002087!5.58e-48!119;CL:0000988!2.25e-46!182;CL:0000037!4.21e-45!172;CL:0000566!4.21e-45!172;CL:0002031!4.94e-45!124;CL:0000763!7.06e-43!112;CL:0000049!7.06e-43!112;CL:0002032!2.86e-39!165;CL:0000837!2.86e-39!165;CL:0002393!5.11e-19!9;CL:0002397!5.11e-19!9;CL:0000134!6.18e-17!358;CL:0002320!2.91e-16!365;CL:0000219!1.45e-14!390;CL:0000080!4.13e-13!6;CL:0000048!1.12e-11!430;CL:0000034!2.34e-11!444;CL:0000723!2.86e-11!436;CL:0000767!1.15e-08!3;CL:0000623!1.47e-08!3;CL:0000825!1.47e-08!3;CL:0000842!7.38e-08!3;CL:0000875!4.85e-07!3;CL:0002396!4.85e-07!3;CL:0000784!6.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.85e-88;33!CL:0002057;9.85e-88;33!CL:0000473;4.06e-62;39!CL:0000234;4.06e-62;39!CL:0000576;1.25e-55;48!CL:0000766;4.37e-35;69!CL:0002087;2.33e-21;104!CL:0000763;3.45e-16;100!CL:0000767;1.41e-14;3!CL:0000623;1.98e-14;3!CL:0000738;6.65e-14;136!CL:0002393;1.14e-11;6!CL:0002397;1.14e-11;6!CL:0000094;2.83e-09;8!CL:0000988;6.67e-08;177!CL:0000081;9.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.44e-104,42;CL:0002057,2.44e-104,42;CL:0000473,2.31e-90,48;CL:0000234,2.31e-90,48;CL:0000766,2.04e-73,72;CL:0002194,8.63e-71,59;CL:0000576,8.63e-71,59;CL:0000040,8.63e-71,59;CL:0000559,8.63e-71,59;CL:0002009,2.90e-68,61;CL:0000839,1.31e-62,66;CL:0000557,1.41e-61,67;CL:0000738,2.30e-61,136;CL:0002087,2.65e-60,115;CL:0002031,1.37e-51,120;CL:0000037,4.25e-48,168;CL:0000763,1.68e-46,108;CL:0000049,1.68e-46,108;CL:0002032,1.15e-45,161;CL:0000837,1.15e-45,161;CL:0000988,3.18e-45,177;CL:0000134,3.06e-18,354;CL:0002320,1.03e-17,361;CL:0000219,7.45e-16,386;CL:0000767,1.29e-14,3;CL:0000623,2.03e-14,3;CL:0000825,2.03e-14,3;CL:0000048,1.41e-13,427;CL:0000723,2.90e-13,433;CL:0000034,7.40e-13,441;CL:0002393,1.64e-11,9;CL:0002397,1.64e-11,9;CL:0000094,2.54e-09,8;CL:0000081,8.86e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-77;42!CL:0000049;6.76e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.86e-50!102;UBERON:0003061!2.86e-50!102;UBERON:0002371!1.73e-49!80;UBERON:0001474!3.95e-45!86;UBERON:0002193!1.81e-44!112;UBERON:0004765!3.03e-38!101;UBERON:0001434!3.03e-38!101;UBERON:0002405!3.90e-32!115;UBERON:0002204!5.82e-20!167;UBERON:0003081!7.20e-19!216;UBERON:0002384!2.40e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.68e-53,76;UBERON:0001474,4.36e-49,82;UBERON:0002390,2.03e-48,98;UBERON:0003061,2.03e-48,98;UBERON:0002405,2.87e-45,93;UBERON:0004765,4.15e-44,90;UBERON:0002193,3.02e-43,108;UBERON:0001434,5.40e-39,100;UBERON:0002204,1.95e-20,167;UBERON:0003081,2.18e-19,203;UBERON:0002384,5.41e-17,371;UBERON:0000926,1.05e-09,315;UBERON:0004120,1.05e-09,315;UBERON:0006603,1.05e-09,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,6.1412703695554,8.3600706590681,0,0,0,0,0,0,7.75593571944628,3.20871115952227,2.60413044859022,0,0,0,2.32637182047304,1.88937971844405,4.12392904019288,4.41615170120801,4.11167888021826,9.91060386864331,1.43846196161075,3.33008918487831,8.98632473576624,1.37898272294647,1.93645405075148,2.70852973188684,4.70605848856512,4.36649840092553,7.86532195557796,4.28517449319264,4.8139354061414,9.59005688698562,1.64925650093358,1.59570926097305,4.26224750532694,1.7412554317715,0.56738522469114,3.11411124497787,2.51248665256743,5.21482918420201,11.0766310799609,1.21079900526674,0.736555271975129,3.48108626184973,0.422510572623884,0.425208599930087,1.04829322754188,0.22465726229299,0.300353785683013,0.16072558669708,1.14005097496499,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0,0,0,0,0,5.04016858061831,4.01160293675261,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,6.03757209606648,5.51875056002918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,3.66714141391649,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90046415273356,6.1412703695554,8.3600706590681,0,0,0,0,0,0,7.75593571944628,3.20871115952227,2.60413044859022,0,0,0,2.32637182047304,1.88937971844405,4.12392904019288,4.41615170120801,4.11167888021826,9.91060386864331,1.43846196161075,3.33008918487831,8.98632473576624,1.37898272294647,1.93645405075148,2.70852973188684,4.70605848856512,4.36649840092553,7.86532195557796,4.28517449319264,4.8139354061414,9.59005688698562,1.64925650093358,1.59570926097305,4.26224750532694,1.7412554317715,0.56738522469114,3.11411124497787,2.51248665256743,5.21482918420201,11.0766310799609,1.21079900526674,0.736555271975129,3.48108626184973,0.422510572623884,0.425208599930087,1.04829322754188,0.22465726229299,0.300353785683013,0.16072558669708,1.14005097496499,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0,0,0,0,0,5.04016858061831,4.01160293675261,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,6.03757209606648,5.51875056002918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,3.66714141391649,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18597484..18597505,+ | |||
}} | }} |
Latest revision as of 05:13, 26 July 2015
Short description: | p@chr19:18597484..18597505, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18597484..18597505, + |
Coexpression cluster: | C520_Natural_CD14_CD8_Basophils_CD4_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.68e-53 | 76 |
bone element | 4.36e-49 | 82 |
hematopoietic system | 2.03e-48 | 98 |
blood island | 2.03e-48 | 98 |
immune system | 2.87e-45 | 93 |
skeletal element | 4.15e-44 | 90 |
hemolymphoid system | 3.02e-43 | 108 |
skeletal system | 5.40e-39 | 100 |
musculoskeletal system | 1.95e-20 | 167 |
lateral plate mesoderm | 2.18e-19 | 203 |
connective tissue | 5.41e-17 | 371 |
mesoderm | 1.05e-09 | 315 |
mesoderm-derived structure | 1.05e-09 | 315 |
presumptive mesoderm | 1.05e-09 | 315 |