FFCP PHASE1:Hg19::chr2:219610207..219610246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9654 | |EntrezGene=9654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28976 | |HGNC=28976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000494428_5end | |association_with_transcript=-29bp_to_ENST00000494428_5end | ||
|cluster_id=chr2:219610207..219610246,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_TTLL4_5end | |description=CAGE_peak_4_at_TTLL4_5end | ||
|id=chr2:219610207..219610246,+ | |id=chr2:219610207..219610246,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.76e-56!76;CL:0002057!1.76e-52!42;CL:0000763!1.01e-50!112;CL:0000049!1.01e-50!112;CL:0002194!1.74e-50!63;CL:0000576!1.74e-50!63;CL:0000040!1.74e-50!63;CL:0000559!1.74e-50!63;CL:0002009!2.20e-48!65;CL:0000860!6.00e-48!45;CL:0000839!1.17e-43!70;CL:0000557!8.53e-43!71;CL:0000738!1.59e-33!140;CL:0000037!3.30e-33!172;CL:0000566!3.30e-33!172;CL:0002032!9.18e-31!165;CL:0000837!9.18e-31!165;CL:0000988!5.25e-30!182;CL:0002087!5.33e-26!119;CL:0002031!8.98e-21!124;CL:0000094!1.35e-12!8;CL:0000134!7.15e-09!358;CL:0000081!1.38e-08!11;CL:0002320!2.75e-08!365;CL:0002393!6.66e-07!9;CL:0002397!6.66e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.76e-56!76;CL:0002057!1.76e-52!42;CL:0000763!1.01e-50!112;CL:0000049!1.01e-50!112;CL:0002194!1.74e-50!63;CL:0000576!1.74e-50!63;CL:0000040!1.74e-50!63;CL:0000559!1.74e-50!63;CL:0002009!2.20e-48!65;CL:0000860!6.00e-48!45;CL:0000839!1.17e-43!70;CL:0000557!8.53e-43!71;CL:0000738!1.59e-33!140;CL:0000037!3.30e-33!172;CL:0000566!3.30e-33!172;CL:0002032!9.18e-31!165;CL:0000837!9.18e-31!165;CL:0000988!5.25e-30!182;CL:0002087!5.33e-26!119;CL:0002031!8.98e-21!124;CL:0000094!1.35e-12!8;CL:0000134!7.15e-09!358;CL:0000081!1.38e-08!11;CL:0002320!2.75e-08!365;CL:0002393!6.66e-07!9;CL:0002397!6.66e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-98;33!CL:0002057;2.04e-98;33!CL:0000473;7.62e-77;39!CL:0000234;7.62e-77;39!CL:0000576;1.01e-57;48!CL:0000766;1.56e-39;69!CL:0000763;4.02e-19;100!CL:0000094;2.69e-16;8!CL:0002087;6.96e-15;104!CL:0000738;2.18e-13;136!CL:0000775;3.99e-12;3!CL:0000081;1.22e-11;11!CL:0000226;3.51e-10;3!CL:0000842;3.51e-10;3!CL:0000771;1.03e-08;2!CL:0000988;7.51e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.77e-99,42;CL:0002057,1.77e-99,42;CL:0000473,1.07e-95,48;CL:0000234,1.07e-95,48;CL:0000766,3.11e-87,72;CL:0002194,8.58e-79,59;CL:0000576,8.58e-79,59;CL:0000040,8.58e-79,59;CL:0000559,8.58e-79,59;CL:0002009,6.22e-76,61;CL:0000839,1.58e-69,66;CL:0000557,2.32e-68,67;CL:0000763,1.83e-57,108;CL:0000049,1.83e-57,108;CL:0000738,3.97e-50,136;CL:0002087,1.68e-42,115;CL:0000037,1.71e-38,168;CL:0000988,5.64e-36,177;CL:0002032,4.46e-35,161;CL:0000837,4.46e-35,161;CL:0002031,4.17e-34,120;CL:0000094,2.70e-16,8;CL:0000134,2.10e-12,354;CL:0000775,3.99e-12,3;CL:0002320,6.01e-12,361;CL:0000081,1.22e-11,11;CL:0000219,2.42e-10,386;CL:0000226,3.63e-10,3;CL:0000842,3.63e-10,3;CL:0000771,1.03e-08,2;CL:0000048,2.17e-08,427;CL:0000723,4.02e-08,433;CL:0000034,8.92e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.97e-72;42!CL:0000049;3.13e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-48!102;UBERON:0003061!1.02e-48!102;UBERON:0002193!1.16e-43!112;UBERON:0002371!1.52e-37!80;UBERON:0001474!4.08e-35!86;UBERON:0002405!7.03e-31!115;UBERON:0004765!2.90e-27!101;UBERON:0001434!2.90e-27!101;UBERON:0003081!7.56e-16!216;UBERON:0000178!1.58e-12!15;UBERON:0000179!1.58e-12!15;UBERON:0000463!1.58e-12!15;UBERON:0002204!2.16e-11!167;UBERON:0002384!1.09e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.02e-48!102;UBERON:0003061!1.02e-48!102;UBERON:0002193!1.16e-43!112;UBERON:0002371!1.52e-37!80;UBERON:0001474!4.08e-35!86;UBERON:0002405!7.03e-31!115;UBERON:0004765!2.90e-27!101;UBERON:0001434!2.90e-27!101;UBERON:0003081!7.56e-16!216;UBERON:0000178!1.58e-12!15;UBERON:0000179!1.58e-12!15;UBERON:0000463!1.58e-12!15;UBERON:0002204!2.16e-11!167;UBERON:0002384!1.09e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.83e-24;15!UBERON:0000179;5.83e-24;15!UBERON:0000463;5.83e-24;15!UBERON:0002390;1.60e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.16e-75,98;UBERON:0003061,1.16e-75,98;UBERON:0002193,1.10e-67,108;UBERON:0002371,3.23e-59,76;UBERON:0001474,3.19e-54,82;UBERON:0004765,1.37e-48,90;UBERON:0002405,1.00e-46,93;UBERON:0001434,8.36e-43,100;UBERON:0003081,7.20e-31,203;UBERON:0000178,6.88e-24,15;UBERON:0000179,6.88e-24,15;UBERON:0000463,6.88e-24,15;UBERON:0002204,7.60e-22,167;UBERON:0000926,6.87e-16,315;UBERON:0004120,6.87e-16,315;UBERON:0006603,6.87e-16,315;UBERON:0002384,2.52e-11,371 | |||
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|short_description=p4@TTLL4 | |short_description=p4@TTLL4 | ||
}} | }} |
Latest revision as of 18:25, 24 September 2015
Short description: | p4@TTLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TTLL4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -29bp_to_ENST00000494428_5end |
EntrezGene: | TTLL4 |
HGNC: | 28976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.16e-75 | 98 |
blood island | 1.16e-75 | 98 |
hemolymphoid system | 1.10e-67 | 108 |
bone marrow | 3.23e-59 | 76 |
bone element | 3.19e-54 | 82 |
skeletal element | 1.37e-48 | 90 |
immune system | 1.00e-46 | 93 |
skeletal system | 8.36e-43 | 100 |
lateral plate mesoderm | 7.20e-31 | 203 |
blood | 6.88e-24 | 15 |
haemolymphatic fluid | 6.88e-24 | 15 |
organism substance | 6.88e-24 | 15 |
musculoskeletal system | 7.60e-22 | 167 |
mesoderm | 6.87e-16 | 315 |
mesoderm-derived structure | 6.87e-16 | 315 |
presumptive mesoderm | 6.87e-16 | 315 |
connective tissue | 2.52e-11 | 371 |