FFCP PHASE1:Hg19::chr19:18499287..18499309,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:18499287..18499309,+
|short_description=p2@GDF15
|description=CAGE_peak_2_at_GDF15_5end
|association_with_transcript=-298bp_to_AF173860_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9518 | |EntrezGene=9518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30142 | |HGNC=30142 | ||
|TSSclassifier=strong | |||
|UniProt=Q99988 | |UniProt=Q99988 | ||
|association_with_transcript=-298bp_to_AF173860_5end | |||
|cluster_id=chr19:18499287..18499309,+ | |||
|coexpression_cluster_id=C1813 | |||
|description=CAGE_peak_2_at_GDF15_5end | |||
|id=chr19:18499287..18499309,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.41e-07!254;CL:0002321!3.38e-07!248;CL:0000220!3.78e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.54e-11;3!CL:0002139;1.02e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.09e-11,3;CL:0002139,9.43e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.55e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.32e-07;8!UBERON:0004536;8.32e-07;8!UBERON:0006558;8.32e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,6.62e-07,8;UBERON:0004536,6.62e-07,8;UBERON:0006558,6.62e-07,8 | |||
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| ||
|short_description=p2@GDF15 | |||
}} | }} |
Latest revision as of 15:54, 16 September 2015
Short description: | p2@GDF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GDF15_5end |
Coexpression cluster: | C1813_somatostatinoma_melanoma_mesenchymal_placenta_smallcell_Keratocytes_renal |
Association with transcript: | -298bp_to_AF173860_5end |
EntrezGene: | GDF15 |
HGNC: | 30142 |
UniProt: | Q99988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.09e-11 | 3 |
endothelial cell of vascular tree | 9.43e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 6.62e-07 | 8 |
lymph vasculature | 6.62e-07 | 8 |
lymphatic part of lymphoid system | 6.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.55e-09 | 2 |