FFCP PHASE1:Hg19::chr2:202285267..202285291,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66008 | |EntrezGene=66008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13206 | |HGNC=13206 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_CU691984,JF432400_5end | |association_with_transcript=-35bp_to_CU691984,JF432400_5end | ||
|cluster_id=chr2:202285267..202285291,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_3_at_TRAK2_5end | |description=CAGE_peak_3_at_TRAK2_5end | ||
|id=chr2:202285267..202285291,- | |id=chr2:202285267..202285291,- | ||
|ontology_enrichment_celltype=CL:0000147!9.12e-11!14;CL:0000148!2.32e-07!10;CL:0000541!2.32e-07!10;CL:0000710!4.90e-07!20;CL:0000075!5.44e-07!27 | |ontology_enrichment_celltype=CL:0000147!9.12e-11!14;CL:0000148!2.32e-07!10;CL:0000541!2.32e-07!10;CL:0000710!4.90e-07!20;CL:0000075!5.44e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.92e-31;10!CL:0000147;5.07e-28;14!CL:0002567;4.76e-20;3!CL:0000710;5.66e-15;20!CL:0000075;5.95e-14;27!CL:0000097;7.34e-12;5!CL:0000235;2.06e-09;6!CL:0002566;7.03e-08;1!CL:0002077;1.41e-07;34!CL:0000149;4.35e-07;4!CL:0000163;8.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.95e-31,10;CL:0000541,7.95e-31,10;CL:0000147,4.91e-28,14;CL:0002567,4.77e-20,3;CL:0000710,5.67e-15,20;CL:0000075,5.56e-14,27;CL:0000097,7.48e-12,5;CL:0002028,7.48e-12,5;CL:0000235,2.77e-09,6;CL:0002077,1.99e-08,34;CL:0000333,2.42e-08,41;CL:0002566,7.03e-08,1;CL:0000149,4.22e-07,4;CL:0000163,8.84e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.20e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.33e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.33e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.95e-09!11 | |ontology_enrichment_uberon=UBERON:0007625!6.95e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.20e-07;1!UBERON:0002079;3.20e-07;1!UBERON:0000996;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.35e-07,1;UBERON:0002079,2.66e-07,1;UBERON:0000996,2.83e-07,1 | |||
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| ||
|short_description=p3@TRAK2 | |short_description=p3@TRAK2 | ||
}} | }} |
Latest revision as of 13:11, 19 September 2015
Short description: | p3@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAK2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -35bp_to_CU691984, JF432400_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.95e-31 | 10 |
melanoblast | 7.95e-31 | 10 |
pigment cell | 4.91e-28 | 14 |
light melanocyte | 4.77e-20 | 3 |
neurecto-epithelial cell | 5.67e-15 | 20 |
columnar/cuboidal epithelial cell | 5.56e-14 | 27 |
mast cell | 7.48e-12 | 5 |
basophil mast progenitor cell | 7.48e-12 | 5 |
macrophage | 2.77e-09 | 6 |
ecto-epithelial cell | 1.99e-08 | 34 |
migratory neural crest cell | 2.42e-08 | 41 |
dark melanocyte | 7.03e-08 | 1 |
visual pigment cell | 4.22e-07 | 4 |
endocrine cell | 8.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 2.35e-07 | 1 |
left cardiac atrium | 2.66e-07 | 1 |
vagina | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.33e-13 | 2 |