FFCP PHASE1:Hg19::chr2:197124961..197124966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_ENST00000433933,uc002utn.1_5end | |association_with_transcript=123bp_to_ENST00000433933,uc002utn.1_5end | ||
|cluster_id=chr2:197124961..197124966,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_7_at_ENST00000433933_5end,CAGE_peak_7_at_uc002utn.1_5end | |description=CAGE_peak_7_at_ENST00000433933_5end,CAGE_peak_7_at_uc002utn.1_5end | ||
|id=chr2:197124961..197124966,+ | |id=chr2:197124961..197124966,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.04e-26!5;CL:0000457!2.04e-26!5;CL:0002191!2.04e-26!5;CL:0000097!2.04e-26!5;CL:0000831!2.04e-26!5;CL:0002028!2.04e-26!5;CL:0000163!1.45e-14!9 | |ontology_enrichment_celltype=CL:0002274!2.04e-26!5;CL:0000457!2.04e-26!5;CL:0002191!2.04e-26!5;CL:0000097!2.04e-26!5;CL:0000831!2.04e-26!5;CL:0002028!2.04e-26!5;CL:0000163!1.45e-14!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.95e-90;5!CL:0000163;1.81e-50;9!CL:0000151;8.95e-12;36!CL:0000322;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.03e-90,5;CL:0002028,7.03e-90,5;CL:0000163,2.49e-50,9;CL:0000151,4.53e-13,36;CL:0000839,6.79e-11,66;CL:0000557,9.72e-11,67;CL:0000322,9.90e-11,3;CL:0000766,5.04e-10,72;CL:0000763,8.55e-07,108;CL:0000049,8.55e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.91e-15;2!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.05e-15,2;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000060!2.64e-10!12 | |ontology_enrichment_uberon=UBERON:0000060!2.64e-10!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0009856;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.05e-15,2;UBERON:0002173,2.05e-15,2;UBERON:0002186,2.05e-15,2;UBERON:0004821,9.90e-11,3;UBERON:0003215,9.90e-11,3;UBERON:0010368,9.90e-11,3;UBERON:0009911,9.90e-11,3;UBERON:0002299,9.90e-11,3;UBERON:0006524,9.90e-11,3;UBERON:0008874,9.90e-11,3;UBERON:0002169,9.90e-11,3;UBERON:0004894,9.90e-11,3;UBERON:0002371,1.61e-09,76;UBERON:0001474,7.51e-09,82;UBERON:0004765,4.28e-08,90;UBERON:0002405,7.62e-08,93;UBERON:0002390,1.85e-07,98;UBERON:0003061,1.85e-07,98;UBERON:0001434,2.57e-07,100;UBERON:0002193,8.55e-07,108 | |||
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|short_description=p7@ENST00000433933,p7@uc002utn.1 | |short_description=p7@ENST00000433933,p7@uc002utn.1 | ||
}} | }} |
Latest revision as of 04:37, 29 July 2015
Short description: | p7@ENST00000433933, p7@uc002utn.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ENST00000433933_5end, CAGE_peak_7_at_uc002utn.1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 123bp_to_ENST00000433933, uc002utn.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.03e-90 | 5 |
basophil mast progenitor cell | 7.03e-90 | 5 |
endocrine cell | 2.49e-50 | 9 |
secretory cell | 4.53e-13 | 36 |
myeloid lineage restricted progenitor cell | 6.79e-11 | 66 |
granulocyte monocyte progenitor cell | 9.72e-11 | 67 |
pneumocyte | 9.90e-11 | 3 |
myeloid leukocyte | 5.04e-10 | 72 |
myeloid cell | 8.55e-07 | 108 |
common myeloid progenitor | 8.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.05e-15 | 2 |
alveolar duct | 2.05e-15 | 2 |
bronchiole | 2.05e-15 | 2 |
pulmonary alveolus epithelium | 9.90e-11 | 3 |
alveolus | 9.90e-11 | 3 |
pulmonary lobule | 9.90e-11 | 3 |
lobule | 9.90e-11 | 3 |
alveolus of lung | 9.90e-11 | 3 |
alveolar system | 9.90e-11 | 3 |
pulmonary acinus | 9.90e-11 | 3 |
alveolar sac | 9.90e-11 | 3 |
alveolar wall | 9.90e-11 | 3 |
bone marrow | 1.61e-09 | 76 |
bone element | 7.51e-09 | 82 |
skeletal element | 4.28e-08 | 90 |
immune system | 7.62e-08 | 93 |
hematopoietic system | 1.85e-07 | 98 |
blood island | 1.85e-07 | 98 |
skeletal system | 2.57e-07 | 100 |
hemolymphoid system | 8.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.05e-15 | 2 |
non-small cell lung carcinoma | 6.04e-07 | 5 |