FFCP PHASE1:Hg19::chr2:165425034..165425044,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2888 | |EntrezGene=2888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |HGNC=4565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_uc010zcv.1_5end | |association_with_transcript=-17bp_to_uc010zcv.1_5end | ||
|cluster_id=chr2:165425034..165425044,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_GRB14_5end | |description=CAGE_peak_8_at_GRB14_5end | ||
|id=chr2:165425034..165425044,- | |id=chr2:165425034..165425044,- | ||
|ontology_enrichment_celltype=CL:0000181!5.08e-08!12;CL:0000417!5.08e-08!12;CL:0000668!5.08e-08!12;CL:0000414!5.08e-08!12;CL:0000412!5.08e-08!12;CL:0000182!5.08e-08!12 | |ontology_enrichment_celltype=CL:0000181!5.08e-08!12;CL:0000417!5.08e-08!12;CL:0000668!5.08e-08!12;CL:0000414!5.08e-08!12;CL:0000412!5.08e-08!12;CL:0000182!5.08e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.38e-24;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.71e-24,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.27e-10;2!UBERON:0004161;1.62e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-24!115;UBERON:0002360!3.14e-08!2;UBERON:0000094!3.14e-08!2;UBERON:0007645!3.14e-08!2;UBERON:0005057!4.02e-08!26;UBERON:0002298!2.67e-07!8;UBERON:0000025!3.07e-07!194;UBERON:0004111!3.19e-07!241;UBERON:0005177!3.31e-07!107;UBERON:0002107!6.40e-07!19;UBERON:0006925!6.40e-07!19;UBERON:0008836!6.40e-07!19;UBERON:0004921!8.24e-07!129;UBERON:0004185!8.24e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.14e-24!115;UBERON:0002360!3.14e-08!2;UBERON:0000094!3.14e-08!2;UBERON:0007645!3.14e-08!2;UBERON:0005057!4.02e-08!26;UBERON:0002298!2.67e-07!8;UBERON:0000025!3.07e-07!194;UBERON:0004111!3.19e-07!241;UBERON:0005177!3.31e-07!107;UBERON:0002107!6.40e-07!19;UBERON:0006925!6.40e-07!19;UBERON:0008836!6.40e-07!19;UBERON:0004921!8.24e-07!129;UBERON:0004185!8.24e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.75e-24;19!UBERON:0006925;5.75e-24;19!UBERON:0001301;4.69e-19;1!UBERON:0002423;2.90e-18;25!UBERON:0002365;3.03e-15;31!UBERON:0002330;3.03e-15;31!UBERON:0002368;2.96e-12;33!UBERON:0000949;1.28e-10;43!UBERON:0005172;2.50e-10;52!UBERON:0005173;2.50e-10;52!UBERON:0006947;3.15e-07;3!UBERON:0004054;3.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.48e-24,19;UBERON:0006925,6.48e-24,19;UBERON:0008836,6.48e-24,19;UBERON:0008835,1.10e-20,22;UBERON:0003894,1.10e-20,22;UBERON:0009854,8.58e-20,23;UBERON:0001301,4.69e-19,1;UBERON:0007499,3.18e-18,25;UBERON:0009497,3.18e-18,25;UBERON:0000015,3.18e-18,25;UBERON:0002423,3.18e-18,25;UBERON:0006235,3.18e-18,25;UBERON:0004161,3.18e-18,25;UBERON:0009856,1.57e-17,26;UBERON:0005172,4.73e-16,54;UBERON:0005173,4.73e-16,54;UBERON:0002365,1.00e-14,31;UBERON:0002330,1.00e-14,31;UBERON:0002417,2.03e-14,60;UBERON:0000916,2.03e-14,60;UBERON:0000949,2.53e-14,45;UBERON:0005177,7.26e-14,101;UBERON:0002368,4.67e-13,35;UBERON:0009569,7.67e-10,112;UBERON:0003929,1.75e-08,54;UBERON:0005911,8.16e-08,82;UBERON:0002530,9.12e-08,59;UBERON:0001041,2.36e-07,87;UBERON:0006947,3.16e-07,3;UBERON:0004054,3.16e-07,3 | |||
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| ||
|short_description=p8@GRB14 | |short_description=p8@GRB14 | ||
}} | }} |
Latest revision as of 22:56, 17 September 2015
Short description: | p8@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRB14_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -17bp_to_uc010zcv.1_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.71e-24 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.48e-24 | 19 |
digestive gland | 6.48e-24 | 19 |
liver bud | 6.48e-24 | 19 |
hepatic diverticulum | 1.10e-20 | 22 |
liver primordium | 1.10e-20 | 22 |
digestive tract diverticulum | 8.58e-20 | 23 |
epididymis | 4.69e-19 | 1 |
epithelial sac | 3.18e-18 | 25 |
epithelium of foregut-midgut junction | 3.18e-18 | 25 |
anatomical boundary | 3.18e-18 | 25 |
hepatobiliary system | 3.18e-18 | 25 |
foregut-midgut junction | 3.18e-18 | 25 |
septum transversum | 3.18e-18 | 25 |
sac | 1.57e-17 | 26 |
abdomen element | 4.73e-16 | 54 |
abdominal segment element | 4.73e-16 | 54 |
exocrine gland | 1.00e-14 | 31 |
exocrine system | 1.00e-14 | 31 |
abdominal segment of trunk | 2.03e-14 | 60 |
abdomen | 2.03e-14 | 60 |
endocrine system | 2.53e-14 | 45 |
trunk region element | 7.26e-14 | 101 |
endocrine gland | 4.67e-13 | 35 |
subdivision of trunk | 7.67e-10 | 112 |
gut epithelium | 1.75e-08 | 54 |
endo-epithelium | 8.16e-08 | 82 |
gland | 9.12e-08 | 59 |
foregut | 2.36e-07 | 87 |
male genital duct | 3.16e-07 | 3 |
internal male genitalia | 3.16e-07 | 3 |