FFCP PHASE1:Hg19::chr19:1652575..1652621,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1652575..1652621,-
|short_description=p1@TCF3
|description=CAGE_peak_1_at_TCF3_5end
|association_with_transcript=-247bp_to_NM_003200_5end
|EntrezGene=692...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6929 | |EntrezGene=6929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11633 | |HGNC=11633 | ||
|TSSclassifier=strong | |||
|UniProt=P15923 | |UniProt=P15923 | ||
|association_with_transcript=-247bp_to_NM_003200_5end | |||
|cluster_id=chr19:1652575..1652621,- | |||
|description=CAGE_peak_1_at_TCF3_5end | |||
|id=chr19:1652575..1652621,- | |||
|ontology_enrichment_celltype=CL:0000144!4.79e-17!625;CL:0002321!1.35e-15!248;CL:0000548!4.55e-15!679;CL:0000004!4.55e-15!679;CL:0000255!4.55e-15!679;CL:0000220!8.69e-15!246;CL:0000012!9.00e-15!682;CL:0002371!2.70e-13!591;CL:0000221!4.36e-11!71;CL:0000945!1.37e-10!24;CL:0000826!1.37e-10!24;CL:0000003!4.05e-10!722;CL:0000133!6.11e-10!59;CL:0000066!1.58e-09!254;CL:0000236!1.29e-07!14;CL:0002319!3.26e-07!25;CL:0000333!9.40e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.31e-10;24!CL:0002319;3.37e-07;25!CL:0000236;4.70e-07;13!CL:1000449;6.31e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.01e-16,250;CL:0000221,6.78e-11,72;CL:0000945,1.37e-10,24;CL:0000826,1.37e-10,24;CL:0000133,6.11e-10,59;CL:0000066,1.34e-09,253;CL:0000236,1.29e-07,14;CL:0002319,3.26e-07,25;CL:1000449,6.20e-07,15;CL:0002078,6.68e-07,45;CL:0000333,9.40e-07,41;CL:0000115,9.46e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.91e-11!51;DOID:0060083!5.91e-11!51;DOID:1240!2.22e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.19e-07;39!DOID:2531;5.42e-07;51!DOID:0060083;5.42e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.91e-11,51;DOID:0060083,5.91e-11,51;DOID:1240,2.22e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0005085!6.81e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.31e-07;15!UBERON:0004819;6.31e-07;15!UBERON:0001285;6.31e-07;15!UBERON:0007684;6.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,6.20e-07,15;UBERON:0009773,6.20e-07,15;UBERON:0001231,6.20e-07,15;UBERON:0001285,6.20e-07,15;UBERON:0007684,6.20e-07,15;UBERON:0004208,6.20e-07,15 | |||
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| ||
|short_description=p1@TCF3 | |||
}} | }} |
Latest revision as of 10:00, 16 September 2015
Short description: | p1@TCF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCF3_5end |
Coexpression cluster: | NA |
Association with transcript: | -247bp_to_NM_003200_5end |
EntrezGene: | TCF3 |
HGNC: | 11633 |
UniProt: | P15923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.01e-16 | 250 |
ectodermal cell | 6.78e-11 | 72 |
lymphocyte of B lineage | 1.37e-10 | 24 |
pro-B cell | 1.37e-10 | 24 |
neurectodermal cell | 6.11e-10 | 59 |
epithelial cell | 1.34e-09 | 253 |
B cell | 1.29e-07 | 14 |
neural cell | 3.26e-07 | 25 |
epithelial cell of nephron | 6.20e-07 | 15 |
meso-epithelial cell | 6.68e-07 | 45 |
migratory neural crest cell | 9.40e-07 | 41 |
endothelial cell | 9.46e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 6.20e-07 | 15 |
renal tubule | 6.20e-07 | 15 |
nephron tubule | 6.20e-07 | 15 |
nephron | 6.20e-07 | 15 |
uriniferous tubule | 6.20e-07 | 15 |
nephrogenic mesenchyme | 6.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.91e-11 | 51 |
immune system cancer | 5.91e-11 | 51 |
leukemia | 2.22e-08 | 39 |