FFCP PHASE1:Hg19::chr2:11680181..11680197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=101bp_to_NM_148903,uc002rbl.2_5end | |association_with_transcript=101bp_to_NM_148903,uc002rbl.2_5end | ||
|cluster_id=chr2:11680181..11680197,+ | |||
|coexpression_cluster_id=C1879 | |coexpression_cluster_id=C1879 | ||
|description=CAGE_peak_13_at_GREB1_5end | |description=CAGE_peak_13_at_GREB1_5end | ||
|id=chr2:11680181..11680197,+ | |id=chr2:11680181..11680197,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.85e-07!4 | |ontology_enrichment_celltype=CL:0002563!6.85e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.69e-10;2!UBERON:0005795;1.29e-07;10!UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10!UBERON:0004161;6.74e-07;11 | |||
|ontology_enrichment_disease=DOID:5093!3.75e-15!4;DOID:1612!3.75e-15!4;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | |ontology_enrichment_disease=DOID:5093!3.75e-15!4;DOID:1612!3.75e-15!4;DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5093;6.72e-38;4!DOID:1612;6.72e-38;4!DOID:7;5.88e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.61e-38,4;DOID:1612,4.61e-38,4;DOID:7,1.07e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.08e-14!11;UBERON:0007023!9.76e-12!115;UBERON:0003133!3.67e-11!48;UBERON:0005156!1.27e-10!59;UBERON:0000990!1.27e-10!59;UBERON:0003101!1.48e-09!22;UBERON:0000079!1.48e-09!22;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0004175!1.80e-08!25;UBERON:0006834!6.59e-08!1;UBERON:0001301!7.03e-08!1;UBERON:0001000!1.51e-07!1;UBERON:0005352!1.51e-07!1;UBERON:0000473!2.11e-07!8;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0002038!3.20e-07!1;UBERON:0009661!3.20e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001242!6.85e-07!4;UBERON:0001262!6.85e-07!4;UBERON:0004786!6.85e-07!4;UBERON:0004808!6.85e-07!4;UBERON:0001277!6.85e-07!4;UBERON:0005795!7.06e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!6.08e-14!11;UBERON:0007023!9.76e-12!115;UBERON:0003133!3.67e-11!48;UBERON:0005156!1.27e-10!59;UBERON:0000990!1.27e-10!59;UBERON:0003101!1.48e-09!22;UBERON:0000079!1.48e-09!22;UBERON:0006947!1.90e-09!3;UBERON:0004054!1.90e-09!3;UBERON:0004175!1.80e-08!25;UBERON:0006834!6.59e-08!1;UBERON:0001301!7.03e-08!1;UBERON:0001000!1.51e-07!1;UBERON:0005352!1.51e-07!1;UBERON:0000473!2.11e-07!8;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0005904!2.75e-07!4;UBERON:0002038!3.20e-07!1;UBERON:0009661!3.20e-07!1;UBERON:0002336!4.61e-07!1;UBERON:0001018!4.61e-07!1;UBERON:0002473!4.61e-07!1;UBERON:0005340!4.61e-07!1;UBERON:0002316!4.61e-07!1;UBERON:0003544!4.61e-07!1;UBERON:0001020!4.61e-07!1;UBERON:0005970!4.61e-07!1;UBERON:0002437!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001242!6.85e-07!4;UBERON:0001262!6.85e-07!4;UBERON:0004786!6.85e-07!4;UBERON:0004808!6.85e-07!4;UBERON:0001277!6.85e-07!4;UBERON:0005795!7.06e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.66e-18;1!UBERON:0001301;3.16e-18;1!UBERON:0005795;1.03e-17;1!UBERON:0000310;1.29e-15;10!UBERON:0001443;2.95e-14;11!UBERON:0004175;8.66e-08;21!UBERON:0003133;2.08e-07;44!UBERON:0003135;5.47e-07;11!UBERON:0006947;6.14e-07;3!UBERON:0004054;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.66e-18,1;UBERON:0001301,3.16e-18,1;UBERON:0000310,1.11e-15,10;UBERON:0001443,2.57e-14,11;UBERON:0003133,1.04e-08,48;UBERON:0005795,2.31e-07,22;UBERON:0005156,4.42e-07,59;UBERON:0000990,4.42e-07,59;UBERON:0003135,5.31e-07,11;UBERON:0006947,6.14e-07,3;UBERON:0004054,6.14e-07,3 | |||
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|short_description=p13@GREB1 | |short_description=p13@GREB1 | ||
}} | }} |
Latest revision as of 15:08, 16 September 2015
Short description: | p13@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GREB1_5end |
Coexpression cluster: | C1879_ovary_MCF7_breast_hepatocellular_uterus_epididymis_testis |
Association with transcript: | 101bp_to_NM_148903, uc002rbl.2_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.66e-18 | 1 |
epididymis | 3.16e-18 | 1 |
breast | 1.11e-15 | 10 |
chest | 2.57e-14 | 11 |
reproductive organ | 1.04e-08 | 48 |
embryonic uterus | 2.31e-07 | 22 |
reproductive structure | 4.42e-07 | 59 |
reproductive system | 4.42e-07 | 59 |
male reproductive organ | 5.31e-07 | 11 |
male genital duct | 6.14e-07 | 3 |
internal male genitalia | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.61e-38 | 4 |
breast cancer | 4.61e-38 | 4 |
disease of anatomical entity | 1.07e-10 | 39 |