FFCP PHASE1:Hg19::chr2:106776780..106776800,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80146 | |EntrezGene=80146 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17729 | |HGNC=17729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000479621_5end | |association_with_transcript=52bp_to_ENST00000479621_5end | ||
|cluster_id=chr2:106776780..106776800,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_UXS1_5end | |description=CAGE_peak_4_at_UXS1_5end | ||
|id=chr2:106776780..106776800,- | |id=chr2:106776780..106776800,- | ||
|ontology_enrichment_celltype=CL:0000791!1.76e-29!18;CL:0000789!1.76e-29!18;CL:0002420!1.76e-29!18;CL:0002419!1.76e-29!18;CL:0000790!1.76e-29!18;CL:0000738!1.88e-27!140;CL:0000084!6.24e-27!25;CL:0000827!6.24e-27!25;CL:0002087!9.42e-27!119;CL:0000037!1.34e-25!172;CL:0000566!1.34e-25!172;CL:0002032!5.67e-24!165;CL:0000837!5.67e-24!165;CL:0000988!3.34e-23!182;CL:0002031!1.58e-22!124;CL:0000625!1.62e-20!11;CL:0000838!5.61e-20!52;CL:0000542!1.94e-19!53;CL:0000051!1.94e-19!53;CL:0002057!1.28e-13!42;CL:0000624!1.18e-12!6;CL:0000860!2.58e-12!45;CL:0000766!9.19e-09!76;CL:0000763!3.77e-08!112;CL:0000049!3.77e-08!112;CL:0002194!7.48e-08!63;CL:0000576!7.48e-08!63;CL:0000040!7.48e-08!63;CL:0000559!7.48e-08!63;CL:0002009!1.89e-07!65;CL:0000898!2.33e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.76e-29!18;CL:0000789!1.76e-29!18;CL:0002420!1.76e-29!18;CL:0002419!1.76e-29!18;CL:0000790!1.76e-29!18;CL:0000738!1.88e-27!140;CL:0000084!6.24e-27!25;CL:0000827!6.24e-27!25;CL:0002087!9.42e-27!119;CL:0000037!1.34e-25!172;CL:0000566!1.34e-25!172;CL:0002032!5.67e-24!165;CL:0000837!5.67e-24!165;CL:0000988!3.34e-23!182;CL:0002031!1.58e-22!124;CL:0000625!1.62e-20!11;CL:0000838!5.61e-20!52;CL:0000542!1.94e-19!53;CL:0000051!1.94e-19!53;CL:0002057!1.28e-13!42;CL:0000624!1.18e-12!6;CL:0000860!2.58e-12!45;CL:0000766!9.19e-09!76;CL:0000763!3.77e-08!112;CL:0000049!3.77e-08!112;CL:0002194!7.48e-08!63;CL:0000576!7.48e-08!63;CL:0000040!7.48e-08!63;CL:0000559!7.48e-08!63;CL:0002009!1.89e-07!65;CL:0000898!2.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.22e-64;18!CL:0000789;3.22e-64;18!CL:0002419;3.22e-64;18!CL:0000084;3.33e-45;25!CL:0000625;9.74e-41;11!CL:0000624;3.53e-29;6!CL:0000898;7.92e-16;3!CL:0000542;1.18e-15;53!CL:0000815;4.42e-11;2!CL:0000792;4.42e-11;2!CL:0002677;4.42e-11;2!CL:0000623;6.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.47e-64,18;CL:0000789,4.47e-64,18;CL:0002420,4.47e-64,18;CL:0002419,4.47e-64,18;CL:0000790,4.47e-64,18;CL:0000084,4.21e-45,25;CL:0000827,4.21e-45,25;CL:0000625,1.00e-40,11;CL:0000624,4.97e-29,6;CL:0000838,2.05e-28,52;CL:0000542,8.53e-28,53;CL:0000051,8.53e-28,53;CL:0000898,6.52e-16,3;CL:0000815,3.46e-11,2;CL:0000792,3.46e-11,2;CL:0002677,3.46e-11,2;CL:0002087,2.42e-10,115;CL:0002031,9.64e-10,120;CL:0000738,3.08e-09,136;CL:0002032,4.74e-09,161;CL:0000837,4.74e-09,161;CL:0000037,1.77e-08,168;CL:0000988,8.25e-08,177;CL:0000623,4.62e-07,3;CL:0000825,4.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.22e-64;18!CL:0000051;1.18e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-12!102;UBERON:0003061!1.28e-12!102;UBERON:0002193!1.69e-11!112;UBERON:0000178!8.92e-09!15;UBERON:0000179!8.92e-09!15;UBERON:0000463!8.92e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!1.28e-12!102;UBERON:0003061!1.28e-12!102;UBERON:0002193!1.69e-11!112;UBERON:0000178!8.92e-09!15;UBERON:0000179!8.92e-09!15;UBERON:0000463!8.92e-09!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.962787081228281,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,3.92355994087075,0.263384084775077,3.14735632182133,2.35806457649499,2.05601498999509,2.50779743086017,3.91106719960308,3.78758244587787,0,4.45641827540694,4.71369451959739,4.2091439970888,5.95768500283034,2.81800903396485,3.38154303655683,1.15106533222573,1.10540007114339,1.73881851441031,1.18629250529648,1.07016331235885,1.04535523804977,2.49280553934646,4.21542542962113,1.03088233644789,2.53019692019503,1.27426165729639,1.30216690771284,3.8018081777935,1.50575119077773,0.639933055772092,3.74792179657038,2.36777252044017,1.64225599384209,4.43534835094411,2.40696176205157,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,1.54011643535698,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.82707210449155,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.13929437434833,0.714695326373367,0.411362273086194,2.59389324477087,3.24018862342869,0.79312517629427,0,0,0,0,0.865615277858669,0,0,2.19537308576098,0.383010740264733,0.423347165447766,0,1.12318871245384,0,0,0,0,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.962787081228281,0,0.329851300186716,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0.736555271975129,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,3.92355994087075,0.263384084775077,3.14735632182133,2.35806457649499,2.05601498999509,2.50779743086017,3.91106719960308,3.78758244587787,0,4.45641827540694,4.71369451959739,4.2091439970888,5.95768500283034,2.81800903396485,3.38154303655683,1.15106533222573,1.10540007114339,1.73881851441031,1.18629250529648,1.07016331235885,1.04535523804977,2.49280553934646,4.21542542962113,1.03088233644789,2.53019692019503,1.27426165729639,1.30216690771284,3.8018081777935,1.50575119077773,0.639933055772092,3.74792179657038,2.36777252044017,1.64225599384209,4.43534835094411,2.40696176205157,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,1.54011643535698,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.82707210449155,0,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.13929437434833,0.714695326373367,0.411362273086194,2.59389324477087,3.24018862342869,0.79312517629427,0,0,0,0,0.865615277858669,0,0,2.19537308576098,0.383010740264733,0.423347165447766,0,1.12318871245384,0,0,0,0,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p4@UXS1 | |short_description=p4@UXS1 | ||
}} | }} |
Latest revision as of 05:08, 16 September 2015
Short description: | p4@UXS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UXS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 52bp_to_ENST00000479621_5end |
EntrezGene: | UXS1 |
HGNC: | 17729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.47e-64 | 18 |
alpha-beta T cell | 4.47e-64 | 18 |
immature T cell | 4.47e-64 | 18 |
mature T cell | 4.47e-64 | 18 |
immature alpha-beta T cell | 4.47e-64 | 18 |
T cell | 4.21e-45 | 25 |
pro-T cell | 4.21e-45 | 25 |
CD8-positive, alpha-beta T cell | 1.00e-40 | 11 |
CD4-positive, alpha-beta T cell | 4.97e-29 | 6 |
lymphoid lineage restricted progenitor cell | 2.05e-28 | 52 |
lymphocyte | 8.53e-28 | 53 |
common lymphoid progenitor | 8.53e-28 | 53 |
naive T cell | 6.52e-16 | 3 |
regulatory T cell | 3.46e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.46e-11 | 2 |
naive regulatory T cell | 3.46e-11 | 2 |
nongranular leukocyte | 2.42e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 9.64e-10 | 120 |
leukocyte | 3.08e-09 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-09 | 161 |
hematopoietic stem cell | 1.77e-08 | 168 |
hematopoietic cell | 8.25e-08 | 177 |
natural killer cell | 4.62e-07 | 3 |
pro-NK cell | 4.62e-07 | 3 |