FFCP PHASE1:Hg19::chr19:15235947..15235958,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:15235947..15235958,-
|short_description=p5@ILVBL
|description=CAGE_peak_5_at_ILVBL_5end
|association_with_transcript=9bp_to_uc010dzx.1_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10994 | |EntrezGene=10994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6041 | |HGNC=6041 | ||
|TSSclassifier=strong | |||
|UniProt=A1L0T0 | |UniProt=A1L0T0 | ||
|association_with_transcript=9bp_to_uc010dzx.1_5end | |||
|cluster_id=chr19:15235947..15235958,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_5_at_ILVBL_5end | |||
|id=chr19:15235947..15235958,- | |||
|ontology_enrichment_celltype=CL:0000147!3.03e-10!14;CL:0000325!8.97e-10!39;CL:0000148!1.41e-09!10;CL:0000541!1.41e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.94e-32;10!CL:0000147;8.37e-30;14!CL:0002567;3.79e-21;3!CL:0000710;8.43e-16;20!CL:0000075;1.78e-11;27!CL:0002615;1.23e-09;3!CL:0000182;1.23e-08;12!CL:0000136;3.16e-08;13!CL:0002566;3.31e-08;1!CL:0002077;5.23e-08;34!CL:0000149;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.24e-32,10;CL:0000541,2.24e-32,10;CL:0000147,8.74e-30,14;CL:0002567,4.06e-21,3;CL:0000710,9.04e-16,20;CL:0000075,1.88e-11,27;CL:0002615,1.38e-09,3;CL:0002077,6.54e-09,34;CL:0000182,1.37e-08,12;CL:0002566,3.32e-08,1;CL:0000149,1.31e-07,4;CL:0000136,4.32e-07,15;CL:0000333,7.37e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.13e-14;11!UBERON:0009497;3.71e-12;13!UBERON:0010227;3.80e-08;1!UBERON:0008425;4.98e-08;1!UBERON:0003124;1.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.14e-07;1!DOID:10165;1.14e-07;1!DOID:1798;1.14e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.97e-08,1;DOID:10165,6.97e-08,1;DOID:1798,6.97e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.32e-11;19!UBERON:0006925;1.32e-11;19!UBERON:0002365;6.29e-09;31!UBERON:0002330;6.29e-09;31!UBERON:0002423;1.07e-08;25!UBERON:0002079;3.80e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-11,19;UBERON:0006925,1.23e-11,19;UBERON:0008836,1.23e-11,19;UBERON:0008835,5.60e-10,22;UBERON:0003894,5.60e-10,22;UBERON:0009854,1.60e-09,23;UBERON:0002365,2.35e-09,31;UBERON:0002330,2.35e-09,31;UBERON:0007499,1.02e-08,25;UBERON:0009497,1.02e-08,25;UBERON:0000015,1.02e-08,25;UBERON:0002423,1.02e-08,25;UBERON:0006235,1.02e-08,25;UBERON:0004161,1.02e-08,25;UBERON:0009856,2.32e-08,26;UBERON:0002079,3.80e-08,1 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,2.00146596706261,1.34088328328186,0,0,0,4.96252693579693,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.851363990735132,0,0.741568885568859,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.530119073285941,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.474541238222193,0.539325232640658,0.588664395376038,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,1.22988438543114,0,0,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0.766765358330422,0,0.088048434013226,0,0,0.12624243342638,5.65131259200304,2.29193055334967,18.7547915536075,8.55362230113526,2.36503233217644,2.10240140490742,7.43148724839503,0,0.43596006883328,0,0,0,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0.336255431980582,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,2.56450125116389,0.328014645699706,0.325378394664303,1.23649213977267,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0,0.460511024178389,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0.7133421029625,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.192444225451024,0,0,0.470719003883896,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0.748562161632879,0.293016358543788,0,0.111443384277478,0,0.71623345421307,0,0.614321404198464,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53633999988968,0,0,0,0.236387681767936,0.689486746482929,0,0,0.885741385813839,0,0,0,0,0,0.32681539055697,0,0.0769502585037971,0,0,0.628303510868405,0.760531603454056,0.638002319463839,0.549585560411174,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0,0.989471500037586,0,0,1.14994833854341,0.611030144933625,0,0.123563938946503,0.313265848516366,0.471807930864739,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.174118413160805,0,0,0.290268993867255,0.292357268344742,0.0821154570532092,0.484945082442097,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,0.426905989478705,0,0.288180834308212,0,0.343189995723929,0.14405479798815,0,0.942776138467182,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.470284307407084,0.360299883542404,0,1.49688046383725,1.07140615895516,1.3480708770837,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0.550157746388935,0,0,0,0,0.335434687599266,0.394028536495991,0.104909176269996,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,1.61207457045891,2.65013777824443,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0.544017803369474,0.2506898940227,1.22538230705385,0,0,0,0,0.1251909307065,0,0.110929051536852,0.372578417648301,0,0,0.151649117541648,0.285465333544967,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,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| ||
|short_description=p5@ILVBL | |||
}} | }} |
Latest revision as of 06:46, 16 September 2015
Short description: | p5@ILVBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ILVBL_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 9bp_to_uc010dzx.1_5end |
EntrezGene: | ILVBL |
HGNC: | 6041 |
UniProt: | A1L0T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.24e-32 | 10 |
melanoblast | 2.24e-32 | 10 |
pigment cell | 8.74e-30 | 14 |
light melanocyte | 4.06e-21 | 3 |
neurecto-epithelial cell | 9.04e-16 | 20 |
columnar/cuboidal epithelial cell | 1.88e-11 | 27 |
adipocyte of omentum tissue | 1.38e-09 | 3 |
ecto-epithelial cell | 6.54e-09 | 34 |
hepatocyte | 1.37e-08 | 12 |
dark melanocyte | 3.32e-08 | 1 |
visual pigment cell | 1.31e-07 | 4 |
fat cell | 4.32e-07 | 15 |
migratory neural crest cell | 7.37e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
liver | 1.23e-11 | 19 |
digestive gland | 1.23e-11 | 19 |
liver bud | 1.23e-11 | 19 |
hepatic diverticulum | 5.60e-10 | 22 |
liver primordium | 5.60e-10 | 22 |
digestive tract diverticulum | 1.60e-09 | 23 |
exocrine gland | 2.35e-09 | 31 |
exocrine system | 2.35e-09 | 31 |
epithelial sac | 1.02e-08 | 25 |
epithelium of foregut-midgut junction | 1.02e-08 | 25 |
anatomical boundary | 1.02e-08 | 25 |
hepatobiliary system | 1.02e-08 | 25 |
foregut-midgut junction | 1.02e-08 | 25 |
septum transversum | 1.02e-08 | 25 |
sac | 2.32e-08 | 26 |
left cardiac atrium | 3.80e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.97e-08 | 1 |
endocrine pancreas cancer | 6.97e-08 | 1 |
pancreatic endocrine carcinoma | 6.97e-08 | 1 |