FFCP PHASE1:Hg19::chr22:31892567..31892580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9814 | |EntrezGene=9814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |HGNC=29064 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382162_5end | |association_with_transcript=0bp_to_ENST00000382162_5end | ||
|cluster_id=chr22:31892567..31892580,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_6_at_SFI1_5end | |description=CAGE_peak_6_at_SFI1_5end | ||
|id=chr22:31892567..31892580,+ | |id=chr22:31892567..31892580,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.44e-17!53;CL:0000051!1.44e-17!53;CL:0000838!1.81e-17!52;CL:0000791!1.52e-12!18;CL:0000789!1.52e-12!18;CL:0002420!1.52e-12!18;CL:0002419!1.52e-12!18;CL:0000790!1.52e-12!18;CL:0000084!2.99e-12!25;CL:0000827!2.99e-12!25;CL:0002087!1.46e-07!119;CL:0000625!1.94e-07!11;CL:0000738!7.02e-07!140 | |ontology_enrichment_celltype=CL:0000542!1.44e-17!53;CL:0000051!1.44e-17!53;CL:0000838!1.81e-17!52;CL:0000791!1.52e-12!18;CL:0000789!1.52e-12!18;CL:0002420!1.52e-12!18;CL:0002419!1.52e-12!18;CL:0000790!1.52e-12!18;CL:0000084!2.99e-12!25;CL:0000827!2.99e-12!25;CL:0002087!1.46e-07!119;CL:0000625!1.94e-07!11;CL:0000738!7.02e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.37e-35;18!CL:0000789;6.37e-35;18!CL:0002419;6.37e-35;18!CL:0000084;2.71e-24;25!CL:0000624;6.21e-24;6!CL:0000542;6.14e-22;53!CL:0000625;5.72e-17;11!CL:0000898;3.52e-13;3!CL:0000623;4.09e-12;3!CL:0000236;2.13e-10;13!CL:0000815;1.00e-09;2!CL:0000792;1.00e-09;2!CL:0002677;1.00e-09;2!CL:0000945;4.21e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.81e-35,18;CL:0000789,3.81e-35,18;CL:0002420,3.81e-35,18;CL:0002419,3.81e-35,18;CL:0000790,3.81e-35,18;CL:0000838,1.70e-34,52;CL:0000542,9.81e-34,53;CL:0000051,9.81e-34,53;CL:0000084,1.88e-24,25;CL:0000827,1.88e-24,25;CL:0000624,2.12e-24,6;CL:0000625,7.06e-17,11;CL:0002031,3.54e-14,120;CL:0002087,1.24e-13,115;CL:0000738,5.06e-13,136;CL:0000898,5.90e-13,3;CL:0000623,2.55e-12,3;CL:0000825,2.55e-12,3;CL:0000988,1.41e-11,177;CL:0000037,1.96e-10,168;CL:0002032,3.91e-10,161;CL:0000837,3.91e-10,161;CL:0000815,1.01e-09,2;CL:0000792,1.01e-09,2;CL:0002677,1.01e-09,2;CL:0000236,2.80e-09,14;CL:0000945,6.43e-07,24;CL:0000826,6.43e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;6.37e-35;18!CL:0000051;6.14e-22;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,1.47187681102573,0.710846162437108,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,1.27562579979026,0.209658645508376,0.112328631146495,0.300353785683013,0,0.855038231223746,0.39783335439818,0,0,1.09227722252426,0,0,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,2.27685187643779,2.34894875748376,1.14681968437569,1.32171328579026,0,0,1.96709770113833,1.96505381374582,2.87842098599313,1.17030546773475,8.47397893247335,2.8406868344084,1.94826728407911,0.779873198196215,3.24066498222321,0.664601683750863,1.08321545506006,0.768547918354051,0.650296737799391,0.657751618414705,1.38175008892924,0.579606171470105,2.22429844743091,4.81573490561484,3.1360657141493,0.679856056185397,1.14966148080576,2.06176467289578,1.77113784413652,0.637130828648193,1.30216690771284,1.90090408889675,0.903450714466637,1.27986611154418,2.49861453104692,0.710331756132051,0,2.41928091869679,1.06976078313403,3.76543450095277,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0,1.24430121722827,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0.538168907066586,0,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0.766765358330422,0,0.088048434013226,0.414656231081544,0,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,1.37921532141349,1.50939302401662,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,0.431428401637234,0.74709290462411,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.41254749960294,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.28853842595289,0.213425530045242,0.318852545457645,0.199579371432817,0.191505370132367,0,0,0,0,0,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0.222886768554957,0.568272293612826,0,0,0,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0.828851746593443,0,0.102268682502155,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.524759999977174,0,0.455173793141999,0.254253650292766,0.472775363535873,0.689486746482929,0.291604613383254,0.347249989866585,0,1.20596438625408,0,0.221158519862449,0.886642856860642,0,0.544692317594951,0.278847488557207,0,0,0,0.179515288819544,0.325942115766024,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,1.77912677208373,0.741383633679017,1.25306339406546,0.337005664903385,0,0.234264445725339,0.182454789215666,0.586993856796269,0,0.394584402849391,0,0,0.126373159256976,0.450970258243478,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.685946781900644,0.261177619741208,0.34945333648406,0.171986032471617,0.290268993867255,0.219267951258557,0.246346371159628,0,0,0,0.27408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| ||
|short_description=p6@SFI1 | |short_description=p6@SFI1 | ||
}} | }} |
Latest revision as of 20:45, 19 September 2015
Short description: | p6@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SFI1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000382162_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.81e-35 | 18 |
alpha-beta T cell | 3.81e-35 | 18 |
immature T cell | 3.81e-35 | 18 |
mature T cell | 3.81e-35 | 18 |
immature alpha-beta T cell | 3.81e-35 | 18 |
lymphoid lineage restricted progenitor cell | 1.70e-34 | 52 |
lymphocyte | 9.81e-34 | 53 |
common lymphoid progenitor | 9.81e-34 | 53 |
T cell | 1.88e-24 | 25 |
pro-T cell | 1.88e-24 | 25 |
CD4-positive, alpha-beta T cell | 2.12e-24 | 6 |
CD8-positive, alpha-beta T cell | 7.06e-17 | 11 |
hematopoietic lineage restricted progenitor cell | 3.54e-14 | 120 |
nongranular leukocyte | 1.24e-13 | 115 |
leukocyte | 5.06e-13 | 136 |
naive T cell | 5.90e-13 | 3 |
natural killer cell | 2.55e-12 | 3 |
pro-NK cell | 2.55e-12 | 3 |
hematopoietic cell | 1.41e-11 | 177 |
hematopoietic stem cell | 1.96e-10 | 168 |
hematopoietic oligopotent progenitor cell | 3.91e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-10 | 161 |
regulatory T cell | 1.01e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.01e-09 | 2 |
naive regulatory T cell | 1.01e-09 | 2 |
B cell | 2.80e-09 | 14 |
lymphocyte of B lineage | 6.43e-07 | 24 |
pro-B cell | 6.43e-07 | 24 |