FFCP PHASE1:Hg19::chr21:44985053..44985072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002zdj.1_5end | |association_with_transcript=0bp_to_uc002zdj.1_5end | ||
|cluster_id=chr21:44985053..44985072,+ | |||
|coexpression_cluster_id=C600 | |coexpression_cluster_id=C600 | ||
|description=CAGE_peak_1_at_uc002zdj.1_5end | |description=CAGE_peak_1_at_uc002zdj.1_5end | ||
|id=chr21:44985053..44985072,+ | |id=chr21:44985053..44985072,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.60e-24!172;CL:0000566!2.60e-24!172;CL:0000988!1.05e-23!182;CL:0002032!3.10e-23!165;CL:0000837!3.10e-23!165;CL:0000738!3.79e-17!140;CL:0002031!1.93e-16!124;CL:0000003!4.13e-16!722;CL:0000763!2.56e-14!112;CL:0000049!2.56e-14!112;CL:0000012!6.28e-14!682;CL:0002087!2.31e-13!119;CL:0000548!1.46e-12!679;CL:0000004!1.46e-12!679;CL:0000255!1.46e-12!679;CL:0000860!3.38e-11!45;CL:0002057!5.12e-11!42;CL:0000034!5.92e-10!444;CL:0000144!1.22e-09!625;CL:0000063!1.28e-09!578;CL:0002371!2.18e-09!591;CL:0000723!3.17e-09!436;CL:0000048!3.36e-09!430;CL:0000542!8.69e-09!53;CL:0000051!8.69e-09!53;CL:0000838!1.59e-08!52;CL:0000219!2.90e-08!390;CL:0000134!3.11e-08!358;CL:0000557!5.55e-08!71;CL:0000839!7.40e-08!70;CL:0002320!2.13e-07!365;CL:0002009!4.02e-07!65;CL:0000766!6.61e-07!76 | |ontology_enrichment_celltype=CL:0000037!2.60e-24!172;CL:0000566!2.60e-24!172;CL:0000988!1.05e-23!182;CL:0002032!3.10e-23!165;CL:0000837!3.10e-23!165;CL:0000738!3.79e-17!140;CL:0002031!1.93e-16!124;CL:0000003!4.13e-16!722;CL:0000763!2.56e-14!112;CL:0000049!2.56e-14!112;CL:0000012!6.28e-14!682;CL:0002087!2.31e-13!119;CL:0000548!1.46e-12!679;CL:0000004!1.46e-12!679;CL:0000255!1.46e-12!679;CL:0000860!3.38e-11!45;CL:0002057!5.12e-11!42;CL:0000034!5.92e-10!444;CL:0000144!1.22e-09!625;CL:0000063!1.28e-09!578;CL:0002371!2.18e-09!591;CL:0000723!3.17e-09!436;CL:0000048!3.36e-09!430;CL:0000542!8.69e-09!53;CL:0000051!8.69e-09!53;CL:0000838!1.59e-08!52;CL:0000219!2.90e-08!390;CL:0000134!3.11e-08!358;CL:0000557!5.55e-08!71;CL:0000839!7.40e-08!70;CL:0002320!2.13e-07!365;CL:0002009!4.02e-07!65;CL:0000766!6.61e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-11;33!CL:0002057;1.62e-11;33!CL:0000473;2.54e-09;39!CL:0000234;2.54e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.08e-28,168;CL:0000988,6.36e-28,177;CL:0002032,2.20e-27,161;CL:0000837,2.20e-27,161;CL:0000738,4.07e-20,136;CL:0000763,1.16e-18,108;CL:0000049,1.16e-18,108;CL:0002031,1.17e-18,120;CL:0002087,2.14e-14,115;CL:0000860,1.14e-13,42;CL:0002057,1.14e-13,42;CL:0000473,1.74e-13,48;CL:0000234,1.74e-13,48;CL:0000557,2.72e-10,67;CL:0000839,3.92e-10,66;CL:0000034,4.63e-10,441;CL:0000134,8.38e-10,354;CL:0000766,1.55e-09,72;CL:0000048,1.55e-09,427;CL:0000723,2.64e-09,433;CL:0002009,6.19e-09,61;CL:0002320,8.83e-09,361;CL:0000219,1.55e-08,386;CL:0000542,2.34e-08,53;CL:0000051,2.34e-08,53;CL:0000838,4.73e-08,52;CL:0002194,5.86e-08,59;CL:0000576,5.86e-08,59;CL:0000040,5.86e-08,59;CL:0000559,5.86e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.58e-10;42 | |||
|ontology_enrichment_disease=DOID:2531!9.22e-08!51;DOID:0060083!9.22e-08!51;DOID:1240!7.02e-07!39 | |ontology_enrichment_disease=DOID:2531!9.22e-08!51;DOID:0060083!9.22e-08!51;DOID:1240!7.02e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.54e-07,51;DOID:0060083,1.54e-07,51;DOID:1240,9.31e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-08!80;UBERON:0001474!4.96e-08!86;UBERON:0001737!1.74e-07!9;UBERON:0002384!2.94e-07!375;UBERON:0004765!3.51e-07!101;UBERON:0001434!3.51e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!2.06e-08!80;UBERON:0001474!4.96e-08!86;UBERON:0001737!1.74e-07!9;UBERON:0002384!2.94e-07!375;UBERON:0004765!3.51e-07!101;UBERON:0001434!3.51e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.85e-09;9!UBERON:0001557;4.85e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.26e-11,76;UBERON:0001474,1.02e-09,82;UBERON:0002405,1.59e-09,93;UBERON:0004765,3.46e-09,90;UBERON:0001737,5.16e-09,9;UBERON:0002384,1.05e-08,371;UBERON:0002390,3.36e-08,98;UBERON:0003061,3.36e-08,98;UBERON:0001434,1.07e-07,100;UBERON:0002193,2.25e-07,108 | |||
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|short_description=p1@uc002zdj.1 | |short_description=p1@uc002zdj.1 | ||
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Latest revision as of 18:18, 28 July 2015
Short description: | p1@uc002zdj.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002zdj.1_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | 0bp_to_uc002zdj.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.26e-11 | 76 |
bone element | 1.02e-09 | 82 |
immune system | 1.59e-09 | 93 |
skeletal element | 3.46e-09 | 90 |
larynx | 5.16e-09 | 9 |
connective tissue | 1.05e-08 | 371 |
hematopoietic system | 3.36e-08 | 98 |
blood island | 3.36e-08 | 98 |
skeletal system | 1.07e-07 | 100 |
hemolymphoid system | 2.25e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.54e-07 | 51 |
immune system cancer | 1.54e-07 | 51 |
leukemia | 9.31e-07 | 39 |