FFCP PHASE1:Hg19::chr21:42540070..42540107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000544566_5end | |association_with_transcript=15bp_to_ENST00000544566_5end | ||
|cluster_id=chr21:42540070..42540107,+ | |||
|coexpression_cluster_id=C4078 | |coexpression_cluster_id=C4078 | ||
|description=CAGE_peak_1_at_BACE2_5end | |description=CAGE_peak_1_at_BACE2_5end | ||
|id=chr21:42540070..42540107,+ | |id=chr21:42540070..42540107,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.24e-19!254;CL:0000222!7.21e-15!119;CL:0002139!9.17e-15!24;CL:0000220!1.93e-14!246;CL:0002321!4.65e-14!248;CL:0000115!5.18e-13!35;CL:0002078!2.46e-12!44;CL:0000213!3.15e-12!57;CL:0000215!3.15e-12!57;CL:0000071!9.85e-11!18;CL:0002546!9.85e-11!18;CL:0000076!3.58e-09!62;CL:0000055!7.07e-07!180 | |ontology_enrichment_celltype=CL:0000066!1.24e-19!254;CL:0000222!7.21e-15!119;CL:0002139!9.17e-15!24;CL:0000220!1.93e-14!246;CL:0002321!4.65e-14!248;CL:0000115!5.18e-13!35;CL:0002078!2.46e-12!44;CL:0000213!3.15e-12!57;CL:0000215!3.15e-12!57;CL:0000071!9.85e-11!18;CL:0002546!9.85e-11!18;CL:0000076!3.58e-09!62;CL:0000055!7.07e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.42e-15;24!CL:0000115;1.93e-11;36!CL:0000071;8.57e-11;18!CL:0002078;7.16e-09;45!CL:0000213;6.39e-08;58!CL:0000215;6.39e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.78e-20,253;CL:0000222,3.09e-15,121;CL:0002139,7.34e-15,24;CL:0002321,1.63e-14,250;CL:0000115,1.45e-13,36;CL:0002078,7.28e-13,45;CL:0000213,8.85e-13,58;CL:0000215,8.85e-13,58;CL:0000071,8.44e-11,18;CL:0002546,8.44e-11,18;CL:0000076,8.85e-09,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.57e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.85e-17!79;UBERON:0007798!1.85e-17!79;UBERON:0000055!2.01e-17!69;UBERON:0004872!7.03e-16!84;UBERON:0003914!3.55e-15!118;UBERON:0001981!5.44e-15!60;UBERON:0007500!5.44e-15!60;UBERON:0004537!5.44e-15!60;UBERON:0006965!5.44e-15!60;UBERON:0000477!8.34e-14!286;UBERON:0004535!1.42e-13!110;UBERON:0001009!3.17e-13!113;UBERON:0000483!5.97e-12!309;UBERON:0000119!6.50e-12!312;UBERON:0001986!9.85e-11!18;UBERON:0004638!9.85e-11!18;UBERON:0004852!9.85e-11!18;UBERON:0004111!1.42e-10!241;UBERON:0003104!2.00e-10!238;UBERON:0009142!2.00e-10!238;UBERON:0000481!9.88e-10!347;UBERON:0001637!1.46e-09!42;UBERON:0003509!1.46e-09!42;UBERON:0004572!1.46e-09!42;UBERON:0000468!4.48e-09!659;UBERON:0003103!4.54e-09!69;UBERON:0004573!5.18e-09!33;UBERON:0004571!5.18e-09!33;UBERON:0001048!9.03e-09!168;UBERON:0000487!1.29e-08!22;UBERON:0000490!4.31e-08!138;UBERON:0006914!4.65e-08!25;UBERON:0002100!1.30e-07!216;UBERON:0000063!1.96e-07!97;UBERON:0000467!2.48e-07!625;UBERON:0001737!4.07e-07!9;UBERON:0000480!4.18e-07!626;UBERON:0000025!6.31e-07!194 | |ontology_enrichment_uberon=UBERON:0002049!1.85e-17!79;UBERON:0007798!1.85e-17!79;UBERON:0000055!2.01e-17!69;UBERON:0004872!7.03e-16!84;UBERON:0003914!3.55e-15!118;UBERON:0001981!5.44e-15!60;UBERON:0007500!5.44e-15!60;UBERON:0004537!5.44e-15!60;UBERON:0006965!5.44e-15!60;UBERON:0000477!8.34e-14!286;UBERON:0004535!1.42e-13!110;UBERON:0001009!3.17e-13!113;UBERON:0000483!5.97e-12!309;UBERON:0000119!6.50e-12!312;UBERON:0001986!9.85e-11!18;UBERON:0004638!9.85e-11!18;UBERON:0004852!9.85e-11!18;UBERON:0004111!1.42e-10!241;UBERON:0003104!2.00e-10!238;UBERON:0009142!2.00e-10!238;UBERON:0000481!9.88e-10!347;UBERON:0001637!1.46e-09!42;UBERON:0003509!1.46e-09!42;UBERON:0004572!1.46e-09!42;UBERON:0000468!4.48e-09!659;UBERON:0003103!4.54e-09!69;UBERON:0004573!5.18e-09!33;UBERON:0004571!5.18e-09!33;UBERON:0001048!9.03e-09!168;UBERON:0000487!1.29e-08!22;UBERON:0000490!4.31e-08!138;UBERON:0006914!4.65e-08!25;UBERON:0002100!1.30e-07!216;UBERON:0000063!1.96e-07!97;UBERON:0000467!2.48e-07!625;UBERON:0001737!4.07e-07!9;UBERON:0000480!4.18e-07!626;UBERON:0000025!6.31e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.57e-11;18!UBERON:0001986;8.57e-11;18!UBERON:0004852;8.57e-11;18!UBERON:0000055;9.02e-10;65!UBERON:0000487;1.04e-08;22!UBERON:0007500;1.72e-08;56!UBERON:0001981;1.72e-08;56!UBERON:0004537;1.72e-08;56!UBERON:0004573;1.80e-08;33!UBERON:0004571;1.80e-08;33!UBERON:0001637;1.84e-08;42!UBERON:0003509;1.84e-08;42!UBERON:0004572;1.84e-08;42!UBERON:0006914;3.54e-08;25!UBERON:0002049;7.98e-08;75!UBERON:0007798;7.98e-08;75!UBERON:0003914;1.84e-07;74!UBERON:0001737;3.67e-07;9!UBERON:0001557;3.67e-07;9 | |||
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| ||
|short_description=p1@BACE2 | |short_description=p1@BACE2 | ||
}} | }} |
Latest revision as of 12:20, 18 September 2015
Short description: | p1@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BACE2_5end |
Coexpression cluster: | C4078_Mast_Endothelial_Lymphatic_Melanocyte_melanoma_Hep2_Hepatic |
Association with transcript: | 15bp_to_ENST00000544566_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.78e-20 | 253 |
mesodermal cell | 3.09e-15 | 121 |
endothelial cell of vascular tree | 7.34e-15 | 24 |
embryonic cell | 1.63e-14 | 250 |
endothelial cell | 1.45e-13 | 36 |
meso-epithelial cell | 7.28e-13 | 45 |
lining cell | 8.85e-13 | 58 |
barrier cell | 8.85e-13 | 58 |
blood vessel endothelial cell | 8.44e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.44e-11 | 18 |
squamous epithelial cell | 8.85e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.61e-18 | 68 |
vasculature | 7.42e-18 | 78 |
vascular system | 7.42e-18 | 78 |
splanchnic layer of lateral plate mesoderm | 4.18e-16 | 83 |
epithelial tube | 1.95e-15 | 117 |
epithelial tube open at both ends | 2.12e-15 | 59 |
blood vessel | 2.12e-15 | 59 |
blood vasculature | 2.12e-15 | 59 |
vascular cord | 2.12e-15 | 59 |
cardiovascular system | 1.24e-13 | 109 |
circulatory system | 2.79e-13 | 112 |
epithelium | 3.36e-11 | 306 |
cell layer | 3.64e-11 | 309 |
blood vessel endothelium | 8.44e-11 | 18 |
endothelium | 8.44e-11 | 18 |
cardiovascular system endothelium | 8.44e-11 | 18 |
primordium | 4.63e-10 | 160 |
anatomical conduit | 7.25e-10 | 240 |
artery | 1.27e-09 | 42 |
arterial blood vessel | 1.27e-09 | 42 |
arterial system | 1.27e-09 | 42 |
compound organ | 3.16e-09 | 68 |
systemic artery | 4.56e-09 | 33 |
systemic arterial system | 4.56e-09 | 33 |
simple squamous epithelium | 9.98e-09 | 22 |
squamous epithelium | 3.68e-08 | 25 |
unilaminar epithelium | 7.35e-08 | 148 |
trunk | 1.43e-07 | 199 |
larynx | 3.70e-07 | 9 |