FFCP PHASE1:Hg19::chr19:14247387..14247409,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:14247387..14247409,-
|short_description=p1@ASF1B
|description=CAGE_peak_1_at_ASF1B_5end
|association_with_transcript=-1bp_to_ENST00000474890_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55723 | |EntrezGene=55723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20996 | |HGNC=20996 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000474890_5end | |||
|cluster_id=chr19:14247387..14247409,- | |||
|coexpression_cluster_id=C1713 | |||
|description=CAGE_peak_1_at_ASF1B_5end | |||
|id=chr19:14247387..14247409,- | |||
|ontology_enrichment_celltype=CL:0000548!1.81e-22!679;CL:0000004!1.81e-22!679;CL:0000255!1.81e-22!679;CL:0000012!4.51e-22!682;CL:0000066!1.24e-18!254;CL:0000003!1.04e-15!722;CL:0000063!4.75e-14!578;CL:0000144!1.13e-08!625;CL:0000333!2.05e-07!41;CL:0002321!7.16e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.12e-07;15!CL:1000497;5.94e-07;17!CL:0002518;5.94e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.84e-19,253;CL:0000333,2.12e-07,41;CL:1000449,4.60e-07,15;CL:1000497,5.43e-07,17;CL:0002518,5.43e-07,17;CL:0002321,6.44e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.40e-38!235;DOID:14566!3.33e-37!239;DOID:2531!1.63e-20!51;DOID:0060083!1.63e-20!51;DOID:0050686!2.18e-19!137;DOID:0050687!5.20e-17!143;DOID:1240!5.89e-16!39;DOID:305!1.03e-15!106;DOID:8692!1.01e-11!31;DOID:0060058!8.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.77e-13;51!DOID:0060083;8.77e-13;51!DOID:1240;1.32e-12;39!DOID:8692;1.77e-11;31!DOID:0060058;8.07e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.28e-38,235;DOID:14566,4.21e-37,239;DOID:2531,1.43e-20,51;DOID:0060083,1.43e-20,51;DOID:0050686,2.55e-19,137;DOID:0050687,5.02e-17,143;DOID:1240,5.32e-16,39;DOID:305,9.28e-16,106;DOID:8692,9.38e-12,31;DOID:0060058,7.82e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.12e-07;15!UBERON:0004819;5.12e-07;15!UBERON:0001285;5.12e-07;15!UBERON:0007684;5.12e-07;15!UBERON:0001737;5.27e-07;9!UBERON:0001557;5.27e-07;9!UBERON:0002113;6.82e-07;24!UBERON:0011143;6.82e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.60e-07,15;UBERON:0009773,4.60e-07,15;UBERON:0001231,4.60e-07,15;UBERON:0001285,4.60e-07,15;UBERON:0007684,4.60e-07,15;UBERON:0004208,4.60e-07,15;UBERON:0001737,5.32e-07,9 | |||
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| ||
|short_description=p1@ASF1B | |||
}} | }} |
Latest revision as of 03:51, 16 September 2015
Short description: | p1@ASF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ASF1B_5end |
Coexpression cluster: | C1713_Alveolar_Renal_Hodgkin_chronic_MCF7_Placental_Melanocyte |
Association with transcript: | -1bp_to_ENST00000474890_5end |
EntrezGene: | ASF1B |
HGNC: | 20996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.84e-19 | 253 |
migratory neural crest cell | 2.12e-07 | 41 |
epithelial cell of nephron | 4.60e-07 | 15 |
kidney cell | 5.43e-07 | 17 |
kidney epithelial cell | 5.43e-07 | 17 |
embryonic cell | 6.44e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.60e-07 | 15 |
renal tubule | 4.60e-07 | 15 |
nephron tubule | 4.60e-07 | 15 |
nephron | 4.60e-07 | 15 |
uriniferous tubule | 4.60e-07 | 15 |
nephrogenic mesenchyme | 4.60e-07 | 15 |
larynx | 5.32e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.28e-38 | 235 |
disease of cellular proliferation | 4.21e-37 | 239 |
hematologic cancer | 1.43e-20 | 51 |
immune system cancer | 1.43e-20 | 51 |
organ system cancer | 2.55e-19 | 137 |
cell type cancer | 5.02e-17 | 143 |
leukemia | 5.32e-16 | 39 |
carcinoma | 9.28e-16 | 106 |
myeloid leukemia | 9.38e-12 | 31 |
lymphoma | 7.82e-07 | 10 |