FFCP PHASE1:Hg19::chr20:62710832..62710879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10287 | |EntrezGene=10287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13735 | |HGNC=13735 | ||
|TSSclassifier=strong | |||
|UniProt=P49795 | |UniProt=P49795 | ||
|association_with_transcript=0bp_to_ENST00000395042,NM_005873,uc002yhy.2,uc002yhz.2_5end | |association_with_transcript=0bp_to_ENST00000395042,NM_005873,uc002yhy.2,uc002yhz.2_5end | ||
|cluster_id=chr20:62710832..62710879,- | |||
|coexpression_cluster_id=C560 | |coexpression_cluster_id=C560 | ||
|description=CAGE_peak_1_at_RGS19_5end | |description=CAGE_peak_1_at_RGS19_5end | ||
|id=chr20:62710832..62710879,- | |id=chr20:62710832..62710879,- | ||
|ontology_enrichment_celltype=CL:0000037!4.59e-59!172;CL:0000566!4.59e-59!172;CL:0002032!1.06e-56!165;CL:0000837!1.06e-56!165;CL:0000988!4.82e-54!182;CL:0000738!3.99e-51!140;CL:0002031!3.23e-45!124;CL:0002087!3.72e-45!119;CL:0000763!7.25e-38!112;CL:0000049!7.25e-38!112;CL:0000766!1.80e-33!76;CL:0000557!4.11e-29!71;CL:0000839!4.76e-28!70;CL:0002009!2.69e-27!65;CL:0002194!9.42e-27!63;CL:0000576!9.42e-27!63;CL:0000040!9.42e-27!63;CL:0000559!9.42e-27!63;CL:0002057!4.52e-23!42;CL:0000860!2.51e-21!45;CL:0000542!5.15e-16!53;CL:0000051!5.15e-16!53;CL:0000838!1.17e-15!52;CL:0000945!1.01e-09!24;CL:0000826!1.01e-09!24;CL:0000236!5.89e-08!14;CL:0000791!6.12e-08!18;CL:0000789!6.12e-08!18;CL:0002420!6.12e-08!18;CL:0002419!6.12e-08!18;CL:0000790!6.12e-08!18;CL:0002393!2.61e-07!9;CL:0002397!2.61e-07!9 | |ontology_enrichment_celltype=CL:0000037!4.59e-59!172;CL:0000566!4.59e-59!172;CL:0002032!1.06e-56!165;CL:0000837!1.06e-56!165;CL:0000988!4.82e-54!182;CL:0000738!3.99e-51!140;CL:0002031!3.23e-45!124;CL:0002087!3.72e-45!119;CL:0000763!7.25e-38!112;CL:0000049!7.25e-38!112;CL:0000766!1.80e-33!76;CL:0000557!4.11e-29!71;CL:0000839!4.76e-28!70;CL:0002009!2.69e-27!65;CL:0002194!9.42e-27!63;CL:0000576!9.42e-27!63;CL:0000040!9.42e-27!63;CL:0000559!9.42e-27!63;CL:0002057!4.52e-23!42;CL:0000860!2.51e-21!45;CL:0000542!5.15e-16!53;CL:0000051!5.15e-16!53;CL:0000838!1.17e-15!52;CL:0000945!1.01e-09!24;CL:0000826!1.01e-09!24;CL:0000236!5.89e-08!14;CL:0000791!6.12e-08!18;CL:0000789!6.12e-08!18;CL:0002420!6.12e-08!18;CL:0002419!6.12e-08!18;CL:0000790!6.12e-08!18;CL:0002393!2.61e-07!9;CL:0002397!2.61e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;4.53e-19;48!CL:0000473;1.45e-18;39!CL:0000234;1.45e-18;39!CL:0000860;2.92e-18;33!CL:0002057;2.92e-18;33!CL:0000766;4.51e-17;69!CL:0000763;5.68e-15;100!CL:0002087;1.42e-14;104!CL:0000738;5.81e-13;136!CL:0000945;4.41e-11;24!CL:0000542;5.74e-11;53!CL:0000988;1.25e-10;177!CL:0000791;5.33e-09;18!CL:0000789;5.33e-09;18!CL:0002419;5.33e-09;18!CL:0000236;1.11e-08;13!CL:0000094;1.97e-07;8!CL:0000084;2.99e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.27e-71,168;CL:0002032,1.35e-67,161;CL:0000837,1.35e-67,161;CL:0000988,3.56e-63,177;CL:0000738,7.06e-61,136;CL:0002087,8.98e-55,115;CL:0002031,4.15e-54,120;CL:0000763,7.58e-46,108;CL:0000049,7.58e-46,108;CL:0000766,5.03e-41,72;CL:0000557,8.44e-36,67;CL:0000839,1.63e-34,66;CL:0002009,1.99e-34,61;CL:0002194,7.99e-34,59;CL:0000576,7.99e-34,59;CL:0000040,7.99e-34,59;CL:0000559,7.99e-34,59;CL:0000473,1.71e-30,48;CL:0000234,1.71e-30,48;CL:0000860,1.27e-26,42;CL:0002057,1.27e-26,42;CL:0000542,2.91e-18,53;CL:0000051,2.91e-18,53;CL:0000838,7.60e-18,52;CL:0000945,4.59e-11,24;CL:0000826,4.59e-11,24;CL:0000236,5.19e-09,14;CL:0000791,5.43e-09,18;CL:0000789,5.43e-09,18;CL:0002420,5.43e-09,18;CL:0002419,5.43e-09,18;CL:0000790,5.43e-09,18;CL:0002393,2.93e-08,9;CL:0002397,2.93e-08,9;CL:0000094,2.06e-07,8;CL:0000084,3.12e-07,25;CL:0000827,3.12e-07,25;CL:0000134,4.07e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-19;42!CL:0000049;3.35e-13;108!CL:0000051;5.74e-11;53!CL:0000790;5.33e-09;18 | |||
|ontology_enrichment_disease=DOID:1240!1.40e-07!39;DOID:8692!1.48e-07!31;DOID:2531!4.40e-07!51;DOID:0060083!4.40e-07!51 | |ontology_enrichment_disease=DOID:1240!1.40e-07!39;DOID:8692!1.48e-07!31;DOID:2531!4.40e-07!51;DOID:0060083!4.40e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.54e-08;31!DOID:1240;1.72e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.58e-09,39;DOID:8692,4.32e-09,31;DOID:2531,5.16e-09,51;DOID:0060083,5.16e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-34!102;UBERON:0003061!1.84e-34!102;UBERON:0002193!5.15e-33!112;UBERON:0002371!2.57e-26!80;UBERON:0001474!2.33e-22!86;UBERON:0002405!7.53e-21!115;UBERON:0004765!1.93e-17!101;UBERON:0001434!1.93e-17!101;UBERON:0007023!7.29e-15!115;UBERON:0003081!3.41e-12!216 | |ontology_enrichment_uberon=UBERON:0002390!1.84e-34!102;UBERON:0003061!1.84e-34!102;UBERON:0002193!5.15e-33!112;UBERON:0002371!2.57e-26!80;UBERON:0001474!2.33e-22!86;UBERON:0002405!7.53e-21!115;UBERON:0004765!1.93e-17!101;UBERON:0001434!1.93e-17!101;UBERON:0007023!7.29e-15!115;UBERON:0003081!3.41e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@RGS19 | |short_description=p1@RGS19 | ||
}} | }} |
Latest revision as of 15:22, 17 September 2015
Short description: | p1@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS19_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000395042, NM_005873, uc002yhy.2, uc002yhz.2_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | P49795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.47e-41 | 98 |
blood island | 2.47e-41 | 98 |
hemolymphoid system | 2.43e-39 | 108 |
immune system | 3.13e-33 | 93 |
bone marrow | 2.96e-32 | 76 |
bone element | 2.53e-27 | 82 |
skeletal element | 1.49e-23 | 90 |
skeletal system | 1.34e-18 | 100 |
adult organism | 1.52e-16 | 114 |
lateral plate mesoderm | 2.05e-14 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.58e-09 | 39 |
myeloid leukemia | 4.32e-09 | 31 |
hematologic cancer | 5.16e-09 | 51 |
immune system cancer | 5.16e-09 | 51 |