FFCP PHASE1:Hg19::chr20:44035891..44035912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55861 | |EntrezGene=55861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15881 | |HGNC=15881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000372712_5end | |association_with_transcript=44bp_to_ENST00000372712_5end | ||
|cluster_id=chr20:44035891..44035912,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_16_at_DBNDD2_5end | |description=CAGE_peak_16_at_DBNDD2_5end | ||
|id=chr20:44035891..44035912,+ | |id=chr20:44035891..44035912,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.87e-16;3!UBERON:0006603;2.65e-13;65!UBERON:0005062;1.86e-12;4!UBERON:0007284;1.86e-12;4!UBERON:0007297;1.06e-10;2!UBERON:0003104;6.49e-09;31!UBERON:0010226;8.34e-07;1!UBERON:0010227;8.80e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.33e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.27e-12,2;DOID:178,9.81e-07,1;DOID:326,9.81e-07,1;DOID:3978,9.81e-07,1;DOID:3394,9.81e-07,1;DOID:5844,9.81e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004151;1.15e-16;3!UBERON:0003978;1.93e-16;3!UBERON:0000946;1.93e-16;3!UBERON:0007100;9.06e-16;25!UBERON:0007023;8.39e-12;114!UBERON:0002081;1.45e-11;2!UBERON:0002133;1.84e-11;2!UBERON:0005090;3.41e-11;2!UBERON:0001630;3.41e-11;2!UBERON:0002037;2.96e-08;6!UBERON:0000948;4.04e-08;22!UBERON:0001723;6.45e-08;3!UBERON:0001033;6.45e-08;3!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3!UBERON:0002084;8.34e-07;1!UBERON:0002082;8.34e-07;1!UBERON:0002079;8.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.20e-44,114;UBERON:0004151,1.15e-16,3;UBERON:0003978,2.38e-16,3;UBERON:0009751,2.38e-16,3;UBERON:0000946,2.38e-16,3;UBERON:0002523,2.38e-16,3;UBERON:0005983,2.38e-16,3;UBERON:0002165,2.38e-16,3;UBERON:0002062,2.38e-16,3;UBERON:0007280,2.38e-16,3;UBERON:0007100,1.80e-14,27;UBERON:0003103,5.60e-12,68;UBERON:0002081,1.45e-11,2;UBERON:0010227,1.45e-11,2;UBERON:0002133,1.99e-11,2;UBERON:0005090,2.85e-11,2;UBERON:0001630,2.85e-11,2;UBERON:0002037,2.75e-08,6;UBERON:0006215,2.75e-08,6;UBERON:0001723,6.35e-08,3;UBERON:0001033,6.35e-08,3;UBERON:0010056,6.35e-08,3;UBERON:0000948,2.27e-07,24;UBERON:0005498,2.27e-07,24;UBERON:0004140,2.27e-07,24;UBERON:0009881,2.27e-07,24;UBERON:0004141,2.27e-07,24;UBERON:0003084,2.27e-07,24;UBERON:0007005,2.27e-07,24;UBERON:0004139,2.27e-07,24;UBERON:0004291,2.27e-07,24;UBERON:0004797,2.91e-07,7;UBERON:0006947,3.14e-07,3;UBERON:0004054,3.14e-07,3;UBERON:0002084,8.34e-07,1;UBERON:0002082,8.34e-07,1;UBERON:0010226,8.34e-07,1;UBERON:0002079,8.81e-07,1 | |||
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| ||
|short_description=p16@DBNDD2 | |short_description=p16@DBNDD2 | ||
}} | }} |
Latest revision as of 11:34, 16 September 2015
Short description: | p16@DBNDD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DBNDD2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 44bp_to_ENST00000372712_5end |
EntrezGene: | DBNDD2 |
HGNC: | 15881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.20e-44 | 114 |
cardiac chamber | 1.15e-16 | 3 |
valve | 2.38e-16 | 3 |
cardiac mesenchyme | 2.38e-16 | 3 |
cardial valve | 2.38e-16 | 3 |
tunica intima | 2.38e-16 | 3 |
heart layer | 2.38e-16 | 3 |
endocardium | 2.38e-16 | 3 |
endocardial cushion | 2.38e-16 | 3 |
presumptive endocardium | 2.38e-16 | 3 |
primary circulatory organ | 1.80e-14 | 27 |
compound organ | 5.60e-12 | 68 |
cardiac atrium | 1.45e-11 | 2 |
future cardiac atrium | 1.45e-11 | 2 |
atrioventricular valve | 1.99e-11 | 2 |
muscle structure | 2.85e-11 | 2 |
muscle organ | 2.85e-11 | 2 |
cerebellum | 2.75e-08 | 6 |
rhombic lip | 2.75e-08 | 6 |
tongue | 6.35e-08 | 3 |
gustatory system | 6.35e-08 | 3 |
future tongue | 6.35e-08 | 3 |
heart | 2.27e-07 | 24 |
primitive heart tube | 2.27e-07 | 24 |
primary heart field | 2.27e-07 | 24 |
anterior lateral plate mesoderm | 2.27e-07 | 24 |
heart tube | 2.27e-07 | 24 |
heart primordium | 2.27e-07 | 24 |
cardiac mesoderm | 2.27e-07 | 24 |
cardiogenic plate | 2.27e-07 | 24 |
heart rudiment | 2.27e-07 | 24 |
blood vessel layer | 2.91e-07 | 7 |
male genital duct | 3.14e-07 | 3 |
internal male genitalia | 3.14e-07 | 3 |
heart left ventricle | 8.34e-07 | 1 |
cardiac ventricle | 8.34e-07 | 1 |
future cardiac ventricle | 8.34e-07 | 1 |
left cardiac atrium | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.27e-12 | 2 |
vascular disease | 9.81e-07 | 1 |
ischemia | 9.81e-07 | 1 |
extrinsic cardiomyopathy | 9.81e-07 | 1 |
myocardial ischemia | 9.81e-07 | 1 |
myocardial infarction | 9.81e-07 | 1 |