FFCP PHASE1:Hg19::chr19:12912626..12912647,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12912626..12912647,-
|short_description=p3@PRDX2
|description=CAGE_peak_3_at_PRDX2_5end
|association_with_transcript=-23bp_to_ENST00000466174_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7001 | |EntrezGene=7001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9353 | |HGNC=9353 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000466174_5end | |||
|cluster_id=chr19:12912626..12912647,- | |||
|coexpression_cluster_id=C3751 | |||
|description=CAGE_peak_3_at_PRDX2_5end | |||
|id=chr19:12912626..12912647,- | |||
|ontology_enrichment_celltype=CL:0002321!7.17e-11!248;CL:0000220!1.56e-10!246;CL:0000393!4.57e-10!60;CL:0000211!4.57e-10!60;CL:0000192!7.98e-10!42;CL:0000514!7.98e-10!42;CL:0000183!3.11e-09!59;CL:0000222!1.57e-08!119;CL:0000359!2.21e-08!32;CL:0000325!3.79e-08!39;CL:0000187!9.09e-08!54;CL:0000221!1.48e-07!71;CL:0000680!2.40e-07!57;CL:0000056!2.40e-07!57;CL:0000355!2.40e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.62e-08;32!CL:0000192;5.97e-07;43!CL:1000449;7.13e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.33e-11,250;CL:0000393,9.41e-10,61;CL:0000211,9.41e-10,61;CL:0000192,1.98e-09,43;CL:0000514,1.98e-09,43;CL:0000359,2.21e-08,32;CL:0000222,2.39e-08,121;CL:0000221,6.61e-08,72;CL:0000187,1.70e-07,55;CL:0000680,4.27e-07,58;CL:0000056,4.27e-07,58;CL:0000355,4.27e-07,58;CL:1000449,7.30e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.97e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;5.29e-07;25!UBERON:0000203;5.29e-07;25!UBERON:0003914;6.77e-07;74!UBERON:0006555;7.13e-07;15!UBERON:0004819;7.13e-07;15!UBERON:0001285;7.13e-07;15!UBERON:0007684;7.13e-07;15!UBERON:0000970;7.64e-07;20 | |||
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| ||
|short_description=p3@PRDX2 | |||
}} | }} |
Latest revision as of 21:16, 15 September 2015
Short description: | p3@PRDX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRDX2_5end |
Coexpression cluster: | C3751_Mesenchymal_Renal_Reticulocytes_Alveolar_neuroblastoma_nonsmall_Neurons |
Association with transcript: | -23bp_to_ENST00000466174_5end |
EntrezGene: | PRDX2 |
HGNC: | 9353 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.33e-11 | 250 |
electrically responsive cell | 9.41e-10 | 61 |
electrically active cell | 9.41e-10 | 61 |
smooth muscle cell | 1.98e-09 | 43 |
smooth muscle myoblast | 1.98e-09 | 43 |
vascular associated smooth muscle cell | 2.21e-08 | 32 |
mesodermal cell | 2.39e-08 | 121 |
ectodermal cell | 6.61e-08 | 72 |
muscle cell | 1.70e-07 | 55 |
muscle precursor cell | 4.27e-07 | 58 |
myoblast | 4.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.27e-07 | 58 |
epithelial cell of nephron | 7.30e-07 | 15 |