FFCP PHASE1:Hg19::chr1:93645314..93645334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343099 | |EntrezGene=343099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30370 | |HGNC=30370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-141bp_to_ENST00000343253_5end | |association_with_transcript=-141bp_to_ENST00000343253_5end | ||
|cluster_id=chr1:93645314..93645334,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_CCDC18_5end | |description=CAGE_peak_4_at_CCDC18_5end | ||
|id=chr1:93645314..93645334,+ | |id=chr1:93645314..93645334,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.80e-56!140;CL:0000037!3.38e-48!172;CL:0000566!3.38e-48!172;CL:0000988!3.59e-47!182;CL:0002087!4.22e-43!119;CL:0002057!4.29e-43!42;CL:0002032!1.28e-42!165;CL:0000837!1.28e-42!165;CL:0002031!1.19e-39!124;CL:0000860!6.29e-39!45;CL:0000766!6.60e-35!76;CL:0002009!2.09e-30!65;CL:0000557!6.76e-30!71;CL:0002194!9.31e-29!63;CL:0000576!9.31e-29!63;CL:0000040!9.31e-29!63;CL:0000559!9.31e-29!63;CL:0000763!1.07e-28!112;CL:0000049!1.07e-28!112;CL:0000839!3.77e-26!70;CL:0000134!2.33e-14!358;CL:0002320!9.31e-14!365;CL:0000219!1.42e-12!390;CL:0000542!2.82e-12!53;CL:0000051!2.82e-12!53;CL:0000838!7.49e-12!52;CL:0002393!3.63e-10!9;CL:0002397!3.63e-10!9;CL:0000094!1.40e-09!8;CL:0000034!5.02e-09!444;CL:0000048!6.58e-09!430;CL:0000723!1.37e-08!436;CL:0000081!4.75e-08!11;CL:0000080!8.81e-07!6 | |ontology_enrichment_celltype=CL:0000738!8.80e-56!140;CL:0000037!3.38e-48!172;CL:0000566!3.38e-48!172;CL:0000988!3.59e-47!182;CL:0002087!4.22e-43!119;CL:0002057!4.29e-43!42;CL:0002032!1.28e-42!165;CL:0000837!1.28e-42!165;CL:0002031!1.19e-39!124;CL:0000860!6.29e-39!45;CL:0000766!6.60e-35!76;CL:0002009!2.09e-30!65;CL:0000557!6.76e-30!71;CL:0002194!9.31e-29!63;CL:0000576!9.31e-29!63;CL:0000040!9.31e-29!63;CL:0000559!9.31e-29!63;CL:0000763!1.07e-28!112;CL:0000049!1.07e-28!112;CL:0000839!3.77e-26!70;CL:0000134!2.33e-14!358;CL:0002320!9.31e-14!365;CL:0000219!1.42e-12!390;CL:0000542!2.82e-12!53;CL:0000051!2.82e-12!53;CL:0000838!7.49e-12!52;CL:0002393!3.63e-10!9;CL:0002397!3.63e-10!9;CL:0000094!1.40e-09!8;CL:0000034!5.02e-09!444;CL:0000048!6.58e-09!430;CL:0000723!1.37e-08!436;CL:0000081!4.75e-08!11;CL:0000080!8.81e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-71;33!CL:0002057;1.89e-71;33!CL:0000576;2.06e-54;48!CL:0000473;8.24e-51;39!CL:0000234;8.24e-51;39!CL:0000766;3.93e-40;69!CL:0000094;2.48e-22;8!CL:0000081;5.80e-20;11!CL:0002087;2.01e-18;104!CL:0000763;9.68e-18;100!CL:0002393;5.12e-17;6!CL:0002397;5.12e-17;6!CL:0000738;2.06e-15;136!CL:0000988;7.58e-13;177!CL:0000775;3.38e-09;3!CL:0000767;3.99e-09;3!CL:0000623;6.67e-09;3!CL:0000875;1.09e-08;3!CL:0002396;1.09e-08;3!CL:0000219;5.51e-08;193!CL:0000771;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.90e-101,42;CL:0002057,5.90e-101,42;CL:0000473,1.94e-91,48;CL:0000234,1.94e-91,48;CL:0000766,1.82e-87,72;CL:0002009,1.74e-75,61;CL:0002194,1.85e-74,59;CL:0000576,1.85e-74,59;CL:0000040,1.85e-74,59;CL:0000559,1.85e-74,59;CL:0000738,9.54e-74,136;CL:0000557,4.78e-71,67;CL:0000839,1.87e-65,66;CL:0000988,1.75e-63,177;CL:0000037,4.10e-61,168;CL:0000763,3.54e-59,108;CL:0000049,3.54e-59,108;CL:0002087,1.94e-58,115;CL:0002032,8.47e-54,161;CL:0000837,8.47e-54,161;CL:0002031,3.24e-53,120;CL:0002393,6.15e-24,9;CL:0002397,6.15e-24,9;CL:0000094,2.07e-22,8;CL:0000134,4.81e-22,354;CL:0002320,2.56e-21,361;CL:0000081,5.20e-20,11;CL:0000219,9.15e-19,386;CL:0000034,3.02e-16,441;CL:0000048,1.21e-15,427;CL:0000723,3.27e-15,433;CL:0000775,2.38e-09,3;CL:0000623,4.29e-09,3;CL:0000825,4.29e-09,3;CL:0000767,4.79e-09,3;CL:0000875,1.01e-08,3;CL:0002396,1.01e-08,3;CL:0000771,1.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-70;42!CL:0000049;2.95e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-28!102;UBERON:0003061!1.21e-28!102;UBERON:0002371!1.23e-26!80;UBERON:0002193!1.01e-24!112;UBERON:0001474!3.81e-24!86;UBERON:0002405!2.98e-21!115;UBERON:0004765!3.46e-19!101;UBERON:0001434!3.46e-19!101;UBERON:0002384!2.16e-12!375;UBERON:0003081!2.34e-07!216;UBERON:0002204!3.50e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.21e-28!102;UBERON:0003061!1.21e-28!102;UBERON:0002371!1.23e-26!80;UBERON:0002193!1.01e-24!112;UBERON:0001474!3.81e-24!86;UBERON:0002405!2.98e-21!115;UBERON:0004765!3.46e-19!101;UBERON:0001434!3.46e-19!101;UBERON:0002384!2.16e-12!375;UBERON:0003081!2.34e-07!216;UBERON:0002204!3.50e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.08e-64,76;UBERON:0002390,7.62e-60,98;UBERON:0003061,7.62e-60,98;UBERON:0001474,7.28e-59,82;UBERON:0002193,3.79e-53,108;UBERON:0004765,1.30e-52,90;UBERON:0002405,1.53e-50,93;UBERON:0001434,3.43e-46,100;UBERON:0002204,5.61e-23,167;UBERON:0003081,2.33e-22,203;UBERON:0002384,2.49e-20,371;UBERON:0000926,4.62e-10,315;UBERON:0004120,4.62e-10,315;UBERON:0006603,4.62e-10,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.787107813136792,9.04737836752479,1.15148819429164,3.56077083626975,0,0,0,0.154934401160603,0.284338464974843,2.34880351467878,17.1738576644882,6.81851121398482,8.24641308720237,0,0,0,1.30858414901608,0.755751887377619,2.66842467306598,3.25400651667958,6.98985409637104,3.40677007984614,7.19230980805376,5.63553554364021,6.85798466676897,12.7555901872549,8.39130088658974,6.77132432971709,1.88242339542605,1.36453075028923,2.02251136000576,5.81559395504715,6.09765151444578,5.75403413219137,0.659702600373432,2.59302754908121,2.13112375266347,5.80418477257168,6.24123747160254,5.60540024096017,11.3061899365534,9.38669253156363,8.03598725408932,10.2917915447673,9.57521853567668,11.7091083353127,1.26753171787165,2.12604299965044,3.35453832813401,3.25753030324836,4.05477610672067,3.69668849403284,3.13514018115373,2.38700012638908,1.64397738388171,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,1.14681968437569,1.32171328579026,0.560508562981536,1.58030450865046,0.786839080455332,0.393010762749165,1.85041349099558,0,0,1.4203434172042,0,0.557052284425868,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,2.21767417547206,2.13952156626806,2.17236605824198,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,1.66943437013739,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,15.511210565933,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,1.32438929824395,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,1.97030760201927,3.88129634747131,4.49200626979119,0,0,0,0,0,2.99602809578873,2.99161459204025,9.94597232246485,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.09856981555372,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0.383010740264733,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0.667396566847634,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0.102268682502155,0.492339221844278,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,3.26173241548684,1.72989514525104,1.14864144456001,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,1.27746588066972,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.202210631562555,0,0.254019996197353,0.795229689809303,0,0.160753148465019,0,0,0.674921674654501,3.86900977278975,0,0,0.157611414598396,0.104909176269996,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0.243585196761792,0.638341257770182,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0.999936979274649,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,0.255788742607303,0,0.314531883711793,0.109209638192014,0,0.850299680406731,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.1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| ||
|short_description=p4@CCDC18 | |short_description=p4@CCDC18 | ||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p4@CCDC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC18_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -141bp_to_ENST00000343253_5end |
EntrezGene: | CCDC18 |
HGNC: | 30370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.08e-64 | 76 |
hematopoietic system | 7.62e-60 | 98 |
blood island | 7.62e-60 | 98 |
bone element | 7.28e-59 | 82 |
hemolymphoid system | 3.79e-53 | 108 |
skeletal element | 1.30e-52 | 90 |
immune system | 1.53e-50 | 93 |
skeletal system | 3.43e-46 | 100 |
musculoskeletal system | 5.61e-23 | 167 |
lateral plate mesoderm | 2.33e-22 | 203 |
connective tissue | 2.49e-20 | 371 |
mesoderm | 4.62e-10 | 315 |
mesoderm-derived structure | 4.62e-10 | 315 |
presumptive mesoderm | 4.62e-10 | 315 |