FFCP PHASE1:Hg19::chr1:72748140..72748229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257194 | |EntrezGene=257194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17302 | |HGNC=17302 | ||
|TSSclassifier=strong | |||
|UniProt=B4DI94 | |UniProt=B4DI94 | ||
|association_with_transcript=0bp_to_ENST00000434200_5end | |association_with_transcript=0bp_to_ENST00000434200_5end | ||
|cluster_id=chr1:72748140..72748229,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_NEGR1_5end | |description=CAGE_peak_1_at_NEGR1_5end | ||
|id=chr1:72748140..72748229,- | |id=chr1:72748140..72748229,- | ||
|ontology_enrichment_celltype=CL:0000055!5.82e-10!180;CL:0000057!4.23e-08!75 | |ontology_enrichment_celltype=CL:0000055!5.82e-10!180;CL:0000057!4.23e-08!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.49e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.07e-34!115;UBERON:0001049!2.36e-26!57;UBERON:0005068!2.36e-26!57;UBERON:0006241!2.36e-26!57;UBERON:0007135!2.36e-26!57;UBERON:0002616!3.03e-24!59;UBERON:0001017!3.77e-22!82;UBERON:0000955!3.93e-22!69;UBERON:0006238!3.93e-22!69;UBERON:0005743!1.30e-21!86;UBERON:0003080!1.61e-21!42;UBERON:0002346!1.72e-21!90;UBERON:0002780!2.41e-21!41;UBERON:0001890!2.41e-21!41;UBERON:0006240!2.41e-21!41;UBERON:0000073!3.63e-21!94;UBERON:0001016!3.63e-21!94;UBERON:0003075!1.20e-20!86;UBERON:0007284!1.20e-20!86;UBERON:0001893!8.21e-19!34;UBERON:0002020!1.18e-18!34;UBERON:0003528!1.18e-18!34;UBERON:0002791!3.98e-18!33;UBERON:0001869!4.16e-18!32;UBERON:0000475!1.02e-17!365;UBERON:0000477!5.00e-17!286;UBERON:0002619!4.02e-16!22;UBERON:0003056!7.40e-16!61;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0000481!1.73e-15!347;UBERON:0000025!2.32e-15!194;UBERON:0001950!5.81e-15!20;UBERON:0000033!3.23e-14!123;UBERON:0004111!6.83e-14!241;UBERON:0000153!1.20e-13!129;UBERON:0007811!1.20e-13!129;UBERON:0000483!1.36e-13!309;UBERON:0000119!2.31e-13!312;UBERON:0000468!3.04e-13!659;UBERON:0000924!7.52e-13!173;UBERON:0006601!7.52e-13!173;UBERON:0004121!4.02e-12!169;UBERON:0000467!3.93e-10!625;UBERON:0000480!6.51e-10!626;UBERON:0000479!9.23e-09!787;UBERON:0002050!1.56e-08!605;UBERON:0005423!1.56e-08!605;UBERON:0000923!2.67e-08!604;UBERON:0005291!2.67e-08!604;UBERON:0006598!2.67e-08!604;UBERON:0002532!2.67e-08!604;UBERON:0000064!3.04e-08!219;UBERON:0000922!3.06e-08!612 | |ontology_enrichment_uberon=UBERON:0007023!5.07e-34!115;UBERON:0001049!2.36e-26!57;UBERON:0005068!2.36e-26!57;UBERON:0006241!2.36e-26!57;UBERON:0007135!2.36e-26!57;UBERON:0002616!3.03e-24!59;UBERON:0001017!3.77e-22!82;UBERON:0000955!3.93e-22!69;UBERON:0006238!3.93e-22!69;UBERON:0005743!1.30e-21!86;UBERON:0003080!1.61e-21!42;UBERON:0002346!1.72e-21!90;UBERON:0002780!2.41e-21!41;UBERON:0001890!2.41e-21!41;UBERON:0006240!2.41e-21!41;UBERON:0000073!3.63e-21!94;UBERON:0001016!3.63e-21!94;UBERON:0003075!1.20e-20!86;UBERON:0007284!1.20e-20!86;UBERON:0001893!8.21e-19!34;UBERON:0002020!1.18e-18!34;UBERON:0003528!1.18e-18!34;UBERON:0002791!3.98e-18!33;UBERON:0001869!4.16e-18!32;UBERON:0000475!1.02e-17!365;UBERON:0000477!5.00e-17!286;UBERON:0002619!4.02e-16!22;UBERON:0003056!7.40e-16!61;UBERON:0000956!1.33e-15!25;UBERON:0000203!1.33e-15!25;UBERON:0000481!1.73e-15!347;UBERON:0000025!2.32e-15!194;UBERON:0001950!5.81e-15!20;UBERON:0000033!3.23e-14!123;UBERON:0004111!6.83e-14!241;UBERON:0000153!1.20e-13!129;UBERON:0007811!1.20e-13!129;UBERON:0000483!1.36e-13!309;UBERON:0000119!2.31e-13!312;UBERON:0000468!3.04e-13!659;UBERON:0000924!7.52e-13!173;UBERON:0006601!7.52e-13!173;UBERON:0004121!4.02e-12!169;UBERON:0000467!3.93e-10!625;UBERON:0000480!6.51e-10!626;UBERON:0000479!9.23e-09!787;UBERON:0002050!1.56e-08!605;UBERON:0005423!1.56e-08!605;UBERON:0000923!2.67e-08!604;UBERON:0005291!2.67e-08!604;UBERON:0006598!2.67e-08!604;UBERON:0002532!2.67e-08!604;UBERON:0000064!3.04e-08!219;UBERON:0000922!3.06e-08!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.77e-17;32!UBERON:0001893;2.68e-17;34!UBERON:0002791;3.52e-17;32!UBERON:0002619;3.96e-17;22!UBERON:0003528;3.99e-17;34!UBERON:0002020;3.99e-17;34!UBERON:0000956;1.33e-16;25!UBERON:0000203;1.33e-16;25!UBERON:0002780;1.97e-16;41!UBERON:0001890;1.97e-16;41!UBERON:0001950;6.92e-16;20!UBERON:0000073;4.77e-15;53!UBERON:0002616;4.77e-15;53!UBERON:0007023;3.28e-10;114!UBERON:0001017;9.35e-10;75!UBERON:0000955;1.05e-09;68!UBERON:0001016;9.15e-09;83 | |||
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|phase1_expression=42.8760975078514,22.9087560563352,27.3451543946184,48.0351832095026,13.8557939272459,17.4467704820074,7.59899634504932,3.79031924056099,5.48489819219661,0.491467873003018,0.697801167972428,0,0,9.2824764720035,9.61052389610956,1.34465029290355,1.20538905604795,5.11217063271161,2.92759679274304,1.72369481307503,5.10001728110633,2.82109249330279,4.57977579409691,4.10623275218653,5.27279086298172,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,9.10161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.22465726229299,0.150176892841506,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.80254281490768,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,2.04580098949649,79.8780526769891,39.6056949402353,53.8829050534264,19.0868627292264,33.0911711805792,2.3633704291017,5.98669373148923,3.51339142772504,12.5085017100316,0,0,0,0,0,4.29283123749616,1.71598473234038,0.74291500265913,1.59009925893364,1.72046919021225,1.73570250803797,2.26123176769604,4.19499436209906,1.6507082516404,2.71693456497854,0,0.71153252537342,1.33888245105868,1.20848795132744,3.04108842287405,0,4.41195696415042,2.43042584364528,4.01848777278359,3.81699933464489,1.57656072676651,7.66583187329416,4.74632829784064,2.5648244150257,0,3.87780264148325,0,8.94549513051573,9.24402735151432,5.69359477496841,12.333974692199,2.4826786753885,2.24271040056923,2.1349799145941,5.18001851676036,3.42332138939743,1.61652806483626,0.980771418680752,0.454072282934794,0.576175924479999,0.468642863667593,1.87296046098192,1.1409436430889,5.97794722207204,5.16711794032565,2.91371299862637,3.93262258766296,6.53293348015658,2.57952066354713,3.61640234115179,9.50402285825643,7.91254173691382,2.73048408581408,2.87447256726495,2.69337782326506,4.62938523526267,9.97430815743058,7.02364193409341,14.4049264025539,9.76547382892879,3.97012641060074,14.351170855109,17.5117058831225,9.32500365102072,11.4034616512073,8.24420233907511,16.7466351029659,16.0060496445167,12.658224918095,9.54882650579747,10.0973509697646,12.7028860126373,12.1234542614109,10.6502877754984,6.14587799188606,6.44330250779853,0,0.272746120590835,0,0,0,0.232387885739037,0.310983165046111,0,0,1.56449532329816,7.71889125831462,0,33.8988587463345,18.0469870417396,4.96888560167344,5.56329477257736,3.13314338848527,5.73528658208448,6.10062443458737,5.45722423955522,5.12358971008625,6.86775127938711,4.23221872641029,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0.686271241194102,0,0,0.100528972411631,0,2.6064664424826,0,2.88662684050547,1.15930404975077,8.10119990227169,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.503946384596579,0,0.179117045405697,0,0,0,0,1.03664057770386,0.144119953416961,0.6312121671319,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0,0,0.560655421726804,0.43596006883328,1.0267360014933,17.8394967745733,7.15312891703765,1.690605505112,20.2112968604502,15.6011155367049,3.34369586540785,7.09245660116391,5.32844358032199,5.57614175266775,0,6.58592269424615,1.95441710576241,2.84313558994037,11.087326221068,1.50719688529793,0.871533458600294,2.89921674427965,0,0,0,5.75099653179798,4.59447743336456,11.4109524032575,27.0741043468373,22.6023954805422,8.95304816199478,0,0.197030760201927,0,0.385029108839245,6.09827098133912,3.90419561572865,0.773288812777695,2.34522771468088,1.27587750330633,0,0,0,6.62534055283355,4.00136416847742,3.25518028439683,2.49565033836969,3.92543775353756,3.46945313074656,2.92853537481783,6.01892199455438,0,15.5209606938757,25.2405727443466,4.42486004500088,11.2948698808508,0.195801157462741,0.343143423810856,0.620304078368662,0.215714200818617,0.106727557803444,0,1.66435439510497,0.30239029332968,14.6383606613078,16.4204311418227,8.41980283299221,5.63812256725084,14.3278029738677,8.36440389946759,7.42090332224955,8.17311377154074,8.70052454034323,10.34802165774,3.11552657510173,6.50778119375772,0,0,0,7.69256802702865,4.73437036817464,3.54035920390445,0,2.84956747286335,0.784349769176855,2.92278449306521,7.91637216696568,1.13733384070897,0.170093705276516,7.34114114747274,1.54227252690289,3.79325012561394,0.501689773854853,1.27438136522519,0,1.34324852833307,0,0,0.769350375349168,0.328014645699706,1.30151357865721,7.83111688522689,1.00726411300178,0.577566499444116,0,0,33.7436252672735,1.64340221096607,2.46477787383431,0.921022048356777,3.30807773962873,5.47843248828196,4.0604674295984,1.96021243057032,1.86967274858148,0,0,0.127612712494584,0,0.464845549297286,20.147990197161,10.455559052409,9.24100740528266,0.532306030317022,9.5692629128258,6.30102344953328,5.58187058293766,8.93180086463202,12.655176988749,3.24071329670502,1.27948895655667,1.71175595213568,1.90921948755562,0.78494864019923,24.8223991464974,3.84351841630477,5.1837457032102,3.43710218674637,3.170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| ||
|short_description=p1@NEGR1 | |short_description=p1@NEGR1 | ||
}} | }} |
Latest revision as of 04:39, 19 September 2015
Short description: | p1@NEGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEGR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000434200_5end |
EntrezGene: | NEGR1 |
HGNC: | 17302 |
UniProt: | B4DI94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.49e-08 | 76 |