FFCP PHASE1:Hg19::chr1:66723029..66723041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000371048_5end | |association_with_transcript=-6bp_to_ENST00000371048_5end | ||
|cluster_id=chr1:66723029..66723041,+ | |||
|coexpression_cluster_id=C557 | |coexpression_cluster_id=C557 | ||
|description=CAGE_peak_54_at_PDE4B_5end | |description=CAGE_peak_54_at_PDE4B_5end | ||
|id=chr1:66723029..66723041,+ | |id=chr1:66723029..66723041,+ | ||
|ontology_enrichment_celltype=CL:0005020!1.37e-08!6;CL:0002138!1.37e-08!6;CL:0005022!1.37e-08!6;CL:0002144!5.83e-08!3;CL:0002139!3.19e-07!24;CL:0002150!3.80e-07!3;CL:0000861!3.80e-07!3 | |ontology_enrichment_celltype=CL:0005020!1.37e-08!6;CL:0002138!1.37e-08!6;CL:0005022!1.37e-08!6;CL:0002144!5.83e-08!3;CL:0002139!3.19e-07!24;CL:0002150!3.80e-07!3;CL:0000861!3.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.83e-66;6!CL:0002139;1.03e-17;24!CL:0000115;3.96e-11;36!CL:0002078;1.99e-08;45!CL:0000213;4.63e-08;58!CL:0000215;4.63e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.83e-66,6;CL:0002138,2.83e-66,6;CL:0005022,2.83e-66,6;CL:0002139,1.03e-17,24;CL:0000115,2.91e-12,36;CL:0002078,4.55e-10,45;CL:0000213,4.33e-08,58;CL:0000215,4.33e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.83e-66;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!9.55e-11!2;UBERON:0001737!4.71e-09!9;UBERON:0002465!1.67e-08!10;UBERON:0001915!5.83e-08!3;UBERON:0001982!5.83e-08!3 | |ontology_enrichment_uberon=UBERON:0003127!9.55e-11!2;UBERON:0001737!4.71e-09!9;UBERON:0002465!1.67e-08!10;UBERON:0001915!5.83e-08!3;UBERON:0001982!5.83e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.99e-50;8!UBERON:0004536;3.99e-50;8!UBERON:0006558;3.99e-50;8!UBERON:0002465;2.00e-40;10!UBERON:0002405;6.71e-16;27!UBERON:0000055;1.58e-09;65!UBERON:0002193;2.06e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.99e-50,8;UBERON:0004536,3.99e-50,8;UBERON:0006558,3.99e-50,8;UBERON:0002465,2.00e-40,10;UBERON:0000055,4.47e-07,68 | |||
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|short_description=p54@PDE4B | |short_description=p54@PDE4B | ||
}} | }} |
Latest revision as of 00:07, 19 September 2015
Short description: | p54@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_54_at_PDE4B_5end |
Coexpression cluster: | C557_Lymphatic_Endothelial_mesothelioma_pleomorphic_Cardiac_lung_aorta |
Association with transcript: | -6bp_to_ENST00000371048_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.83e-66 | 6 |
endothelial cell of lymphatic vessel | 2.83e-66 | 6 |
vascular lymphangioblast | 2.83e-66 | 6 |
endothelial cell of vascular tree | 1.03e-17 | 24 |
endothelial cell | 2.91e-12 | 36 |
meso-epithelial cell | 4.55e-10 | 45 |
lining cell | 4.33e-08 | 58 |
barrier cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.99e-50 | 8 |
lymph vasculature | 3.99e-50 | 8 |
lymphatic part of lymphoid system | 3.99e-50 | 8 |
lymphoid system | 2.00e-40 | 10 |
vessel | 4.47e-07 | 68 |