FFCP PHASE1:Hg19::chr1:64506368..64506373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:64506368..64506373,- | |||
|coexpression_cluster_id=C495 | |coexpression_cluster_id=C495 | ||
|description=CAGE_peak_at_chr1:64506368..64506373,- | |description=CAGE_peak_at_chr1:64506368..64506373,- | ||
|id=chr1:64506368..64506373,- | |id=chr1:64506368..64506373,- | ||
|ontology_enrichment_celltype=CL:0000188!3.92e-17!9;CL:0000349!2.45e-15!3;CL:0002577!2.45e-15!3;CL:0000594!8.66e-14!3;CL:0000515!2.24e-11!4;CL:0002536!1.14e-10!2;CL:0002195!4.43e-10!2;CL:0002571!4.43e-10!2;CL:0000055!6.23e-10!180;CL:0000680!5.34e-09!57;CL:0000056!5.34e-09!57;CL:0000355!5.34e-09!57;CL:0002586!3.44e-07!3 | |ontology_enrichment_celltype=CL:0000188!3.92e-17!9;CL:0000349!2.45e-15!3;CL:0002577!2.45e-15!3;CL:0000594!8.66e-14!3;CL:0000515!2.24e-11!4;CL:0002536!1.14e-10!2;CL:0002195!4.43e-10!2;CL:0002571!4.43e-10!2;CL:0000055!6.23e-10!180;CL:0000680!5.34e-09!57;CL:0000056!5.34e-09!57;CL:0000355!5.34e-09!57;CL:0002586!3.44e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;7.08e-34;3!CL:0000515;1.53e-09;3!CL:0002590;1.53e-09;3!CL:0000056;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.66e-34,3;CL:0002590,1.41e-09,3;CL:0000515,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.12e-12!83;UBERON:0002329!8.12e-12!83;UBERON:0003077!8.12e-12!83;UBERON:0003059!8.12e-12!83;UBERON:0007282!8.12e-12!83;UBERON:0009618!8.12e-12!83;UBERON:0007285!8.12e-12!83;UBERON:0001987!1.28e-11!4;UBERON:0004340!1.28e-11!4;UBERON:0004290!1.40e-09!70;UBERON:0005631!1.81e-08!14;UBERON:0000158!1.81e-08!14;UBERON:0001134!2.96e-08!61;UBERON:0002036!2.96e-08!61;UBERON:0003082!2.96e-08!61;UBERON:0002385!6.41e-08!63;UBERON:0001015!6.41e-08!63;UBERON:0000383!6.41e-08!63;UBERON:0000486!9.23e-08!82;UBERON:0001781!3.44e-07!3;UBERON:0001782!3.44e-07!3;UBERON:0005424!3.44e-07!3;UBERON:0005256!4.36e-07!143;UBERON:0003124!8.29e-07!7 | |ontology_enrichment_uberon=UBERON:0000914!8.12e-12!83;UBERON:0002329!8.12e-12!83;UBERON:0003077!8.12e-12!83;UBERON:0003059!8.12e-12!83;UBERON:0007282!8.12e-12!83;UBERON:0009618!8.12e-12!83;UBERON:0007285!8.12e-12!83;UBERON:0001987!1.28e-11!4;UBERON:0004340!1.28e-11!4;UBERON:0004290!1.40e-09!70;UBERON:0005631!1.81e-08!14;UBERON:0000158!1.81e-08!14;UBERON:0001134!2.96e-08!61;UBERON:0002036!2.96e-08!61;UBERON:0003082!2.96e-08!61;UBERON:0002385!6.41e-08!63;UBERON:0001015!6.41e-08!63;UBERON:0000383!6.41e-08!63;UBERON:0000486!9.23e-08!82;UBERON:0001781!3.44e-07!3;UBERON:0001782!3.44e-07!3;UBERON:0005424!3.44e-07!3;UBERON:0005256!4.36e-07!143;UBERON:0003124!8.29e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.05e-25;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.64e-26,4;UBERON:0004340,7.64e-26,4;UBERON:0003124,3.06e-15,7;UBERON:0005631,4.19e-08,14;UBERON:0000158,4.19e-08,14 | |||
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|short_description=p@chr1:64506368..64506373,- | |short_description=p@chr1:64506368..64506373,- | ||
}} | }} |
Latest revision as of 09:42, 28 July 2015
Short description: | p@chr1:64506368..64506373, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:64506368..64506373, - |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.66e-34 | 3 |
smooth muscle cell of the brain vasculature | 1.41e-09 | 3 |
skeletal muscle myoblast | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
placenta | 7.64e-26 | 4 |
allantois | 7.64e-26 | 4 |
chorion | 3.06e-15 | 7 |
extraembryonic membrane | 4.19e-08 | 14 |
membranous layer | 4.19e-08 | 14 |