FFCP PHASE1:Hg19::chr1:37984640..37984646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:37984640..37984646,+ | |||
|coexpression_cluster_id=C1178 | |coexpression_cluster_id=C1178 | ||
|description=CAGE_peak_at_chr1:37984640..37984646,+ | |description=CAGE_peak_at_chr1:37984640..37984646,+ | ||
|id=chr1:37984640..37984646,+ | |id=chr1:37984640..37984646,+ | ||
|ontology_enrichment_celltype=CL:0000084!3.92e-19!25;CL:0000827!3.92e-19!25;CL:0000791!1.96e-18!18;CL:0000789!1.96e-18!18;CL:0002420!1.96e-18!18;CL:0002419!1.96e-18!18;CL:0000790!1.96e-18!18;CL:0000838!1.57e-17!52;CL:0000542!5.53e-17!53;CL:0000051!5.53e-17!53;CL:0000988!4.31e-12!182;CL:0000037!5.75e-12!172;CL:0000566!5.75e-12!172;CL:0000625!1.43e-11!11;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000738!5.86e-09!140;CL:0002087!4.78e-08!119;CL:0002031!6.19e-08!124;CL:0000624!1.80e-07!6;CL:0000080!5.42e-07!6 | |ontology_enrichment_celltype=CL:0000084!3.92e-19!25;CL:0000827!3.92e-19!25;CL:0000791!1.96e-18!18;CL:0000789!1.96e-18!18;CL:0002420!1.96e-18!18;CL:0002419!1.96e-18!18;CL:0000790!1.96e-18!18;CL:0000838!1.57e-17!52;CL:0000542!5.53e-17!53;CL:0000051!5.53e-17!53;CL:0000988!4.31e-12!182;CL:0000037!5.75e-12!172;CL:0000566!5.75e-12!172;CL:0000625!1.43e-11!11;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000738!5.86e-09!140;CL:0002087!4.78e-08!119;CL:0002031!6.19e-08!124;CL:0000624!1.80e-07!6;CL:0000080!5.42e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.84e-24;25!CL:0000625;7.80e-20;11!CL:0000791;4.28e-19;18!CL:0000789;4.28e-19;18!CL:0002419;4.28e-19;18!CL:0000623;2.42e-14;3!CL:0000542;1.56e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.92e-24,25;CL:0000827,6.92e-24,25;CL:0000625,9.05e-20,11;CL:0000791,5.48e-19,18;CL:0000789,5.48e-19,18;CL:0002420,5.48e-19,18;CL:0002419,5.48e-19,18;CL:0000790,5.48e-19,18;CL:0000838,1.86e-16,52;CL:0000542,4.40e-16,53;CL:0000051,4.40e-16,53;CL:0000623,1.53e-14,3;CL:0000825,1.53e-14,3;CL:0000988,1.24e-12,177;CL:0000037,2.38e-12,168;CL:0002032,1.06e-10,161;CL:0000837,1.06e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.28e-19;18!CL:0000051;1.56e-08;53!UBERON:0009117;1.34e-07;10!UBERON:0005564;1.34e-07;10 | |||
|ontology_enrichment_disease=DOID:2531!3.41e-07!51;DOID:0060083!3.41e-07!51 | |ontology_enrichment_disease=DOID:2531!3.41e-07!51;DOID:0060083!3.41e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.10e-14;8!DOID:1240;5.00e-12;39!DOID:8692;7.55e-11;31!DOID:2531;9.34e-11;51!DOID:0060083;9.34e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.38e-14,8;DOID:1240,2.01e-14,39;DOID:2531,1.75e-12,51;DOID:0060083,1.75e-12,51;DOID:8692,2.23e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.04e-10!15;UBERON:0000179!6.04e-10!15;UBERON:0000463!6.04e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!6.04e-10!15;UBERON:0000179!6.04e-10!15;UBERON:0000463!6.04e-10!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:37984640..37984646,+ | |short_description=p@chr1:37984640..37984646,+ | ||
}} | }} |
Latest revision as of 07:53, 28 July 2015
Short description: | p@chr1:37984640..37984646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:37984640..37984646, + |
Coexpression cluster: | C1178_embryonic_testicular_teratocarcinoma_lymphangiectasia_epithelioid_bronchioalveolar_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.92e-24 | 25 |
pro-T cell | 6.92e-24 | 25 |
CD8-positive, alpha-beta T cell | 9.05e-20 | 11 |
mature alpha-beta T cell | 5.48e-19 | 18 |
alpha-beta T cell | 5.48e-19 | 18 |
immature T cell | 5.48e-19 | 18 |
mature T cell | 5.48e-19 | 18 |
immature alpha-beta T cell | 5.48e-19 | 18 |
lymphoid lineage restricted progenitor cell | 1.86e-16 | 52 |
lymphocyte | 4.40e-16 | 53 |
common lymphoid progenitor | 4.40e-16 | 53 |
natural killer cell | 1.53e-14 | 3 |
pro-NK cell | 1.53e-14 | 3 |
hematopoietic cell | 1.24e-12 | 177 |
hematopoietic stem cell | 2.38e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.38e-14 | 8 |
leukemia | 2.01e-14 | 39 |
hematologic cancer | 1.75e-12 | 51 |
immune system cancer | 1.75e-12 | 51 |
myeloid leukemia | 2.23e-10 | 31 |