FFCP PHASE1:Hg19::chr1:247579468..247579486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114548 | |EntrezGene=114548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16400 | |HGNC=16400 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P20,B2RC97 | |UniProt=Q96P20,B2RC97 | ||
|association_with_transcript=10bp_to_ENST00000366497,ENST00000391828,NM_001079821,NM_001127461,uc001icr.2,uc001ics.2_5end | |association_with_transcript=10bp_to_ENST00000366497,ENST00000391828,NM_001079821,NM_001127461,uc001icr.2,uc001ics.2_5end | ||
|cluster_id=chr1:247579468..247579486,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_1_at_NLRP3_5end | |description=CAGE_peak_1_at_NLRP3_5end | ||
|id=chr1:247579468..247579486,+ | |id=chr1:247579468..247579486,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.29e-48!172;CL:0000566!2.29e-48!172;CL:0000763!6.17e-46!112;CL:0000049!6.17e-46!112;CL:0002032!2.50e-44!165;CL:0000837!2.50e-44!165;CL:0000766!5.73e-43!76;CL:0000988!6.36e-43!182;CL:0000738!9.31e-41!140;CL:0000557!9.17e-38!71;CL:0002057!3.39e-37!42;CL:0000839!7.46e-37!70;CL:0002009!1.24e-35!65;CL:0002194!1.41e-34!63;CL:0000576!1.41e-34!63;CL:0000040!1.41e-34!63;CL:0000559!1.41e-34!63;CL:0002031!1.02e-33!124;CL:0000860!2.87e-33!45;CL:0002087!8.93e-33!119;CL:0002393!9.55e-09!9;CL:0002397!9.55e-09!9;CL:0000094!2.76e-08!8;CL:0000134!6.83e-08!358;CL:0002320!4.31e-07!365 | |ontology_enrichment_celltype=CL:0000037!2.29e-48!172;CL:0000566!2.29e-48!172;CL:0000763!6.17e-46!112;CL:0000049!6.17e-46!112;CL:0002032!2.50e-44!165;CL:0000837!2.50e-44!165;CL:0000766!5.73e-43!76;CL:0000988!6.36e-43!182;CL:0000738!9.31e-41!140;CL:0000557!9.17e-38!71;CL:0002057!3.39e-37!42;CL:0000839!7.46e-37!70;CL:0002009!1.24e-35!65;CL:0002194!1.41e-34!63;CL:0000576!1.41e-34!63;CL:0000040!1.41e-34!63;CL:0000559!1.41e-34!63;CL:0002031!1.02e-33!124;CL:0000860!2.87e-33!45;CL:0002087!8.93e-33!119;CL:0002393!9.55e-09!9;CL:0002397!9.55e-09!9;CL:0000094!2.76e-08!8;CL:0000134!6.83e-08!358;CL:0002320!4.31e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-43;33!CL:0002057;1.82e-43;33!CL:0000576;9.61e-40;48!CL:0000473;9.06e-39;39!CL:0000234;9.06e-39;39!CL:0000766;6.28e-33;69!CL:0000763;6.06e-24;100!CL:0002087;5.22e-15;104!CL:0000738;4.73e-13;136!CL:0000094;1.47e-12;8!CL:0000988;2.07e-10;177!CL:0002393;4.67e-10;6!CL:0002397;4.67e-10;6!CL:0000081;1.42e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.81e-73,72;CL:0000763,4.59e-73,108;CL:0000049,4.59e-73,108;CL:0000037,1.37e-68,168;CL:0000988,1.67e-63,177;CL:0000473,1.78e-63,48;CL:0000234,1.78e-63,48;CL:0000557,1.33e-62,67;CL:0002032,5.86e-62,161;CL:0000837,5.86e-62,161;CL:0000839,3.08e-61,66;CL:0002194,4.77e-61,59;CL:0000576,4.77e-61,59;CL:0000040,4.77e-61,59;CL:0000559,4.77e-61,59;CL:0002009,8.32e-61,61;CL:0000860,5.06e-60,42;CL:0002057,5.06e-60,42;CL:0000738,5.48e-59,136;CL:0002087,1.80e-47,115;CL:0002031,1.51e-46,120;CL:0000134,7.08e-22,354;CL:0002320,7.41e-21,361;CL:0000219,2.69e-17,386;CL:0000034,1.48e-14,441;CL:0000048,3.75e-14,427;CL:0000723,1.51e-13,433;CL:0002393,2.63e-13,9;CL:0002397,2.63e-13,9;CL:0000094,1.49e-12,8;CL:0000081,1.43e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.47e-43;42!CL:0000049;1.63e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;1.20e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.43e-09,31;DOID:1240,5.91e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.21e-39!102;UBERON:0003061!4.21e-39!102;UBERON:0002193!1.85e-34!112;UBERON:0002371!8.90e-32!80;UBERON:0001474!1.23e-27!86;UBERON:0004765!2.55e-23!101;UBERON:0001434!2.55e-23!101;UBERON:0002405!1.62e-22!115;UBERON:0007023!9.54e-15!115;UBERON:0003081!3.38e-14!216;UBERON:0002204!1.10e-09!167;UBERON:0002384!4.28e-07!375;UBERON:0000178!4.47e-07!15;UBERON:0000179!4.47e-07!15;UBERON:0000463!4.47e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!4.21e-39!102;UBERON:0003061!4.21e-39!102;UBERON:0002193!1.85e-34!112;UBERON:0002371!8.90e-32!80;UBERON:0001474!1.23e-27!86;UBERON:0004765!2.55e-23!101;UBERON:0001434!2.55e-23!101;UBERON:0002405!1.62e-22!115;UBERON:0007023!9.54e-15!115;UBERON:0003081!3.38e-14!216;UBERON:0002204!1.10e-09!167;UBERON:0002384!4.28e-07!375;UBERON:0000178!4.47e-07!15;UBERON:0000179!4.47e-07!15;UBERON:0000463!4.47e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.38e-11;15!UBERON:0000179;1.38e-11;15!UBERON:0000463;1.38e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.48e-60,98;UBERON:0003061,4.48e-60,98;UBERON:0002371,6.21e-55,76;UBERON:0002193,2.55e-52,108;UBERON:0001474,1.92e-49,82;UBERON:0004765,2.85e-43,90;UBERON:0002405,3.10e-41,93;UBERON:0001434,2.52e-38,100;UBERON:0003081,6.98e-23,203;UBERON:0002384,4.62e-20,371;UBERON:0002204,1.10e-17,167;UBERON:0000178,1.39e-11,15;UBERON:0000179,1.39e-11,15;UBERON:0000463,1.39e-11,15;UBERON:0000926,6.19e-09,315;UBERON:0004120,6.19e-09,315;UBERON:0006603,6.19e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.993374274723366,0.410502947249729,0.393553906568396,46.8103489450196,40.3020868002073,43.6581467751334,0,0,0,0,0,4.40400659002271,1095.80291807605,1007.13421519505,795.344841173597,2.23915474239924,0,2.57575567634187,11.4864608635856,11.3362783106643,17.7086364667106,28.8212005763049,24.2589053932877,45.5268365215802,103.856953628296,70.1880335889736,89.8632473576624,505.052422279146,379.54499394729,325.02356782642,28.0481085918481,23.1970227549169,17.3037083022715,955.899995874329,506.105075699,1373.29614621634,24.0791449136303,30.318475958488,41.3438008016713,269.023964208697,305.820636108524,397.983417108172,27.6373531782418,50.5838430867595,37.1392924445749,99.8909179345059,187.821594353658,250.954673240621,12.2528066060926,39.9696083934282,21.5948404873627,34.260232499681,57.8181037439799,48.3784015958211,5.70025487482497,3.9783335439818,8.58521522693779,0,0,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,2.84606484554724,20.5533016279829,11.4681968437569,10.5737062863221,61.655941927969,3.423993102076,3.14735632182133,5.89516144123747,5.34563897398724,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,1.71813722741315,1.26509846009751,0.95569624297229,0,0,0.451725357233318,1.91979916731628,0,1.4206635122641,0,2.41928091869679,2.13952156626806,2.60683926989038,0,0,0,0,0,0,0,0,0,0,1.22968699970376,0.654895377488563,0,0,0,0,0.26591592103773,17.8867968229006,3.43196946468077,4.82894751728434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,86.9750755078017,89.1894607541148,0,0,0,0,0,4.25602058638028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0,1.78357394746474,0,0.16798212819886,0,0.0895585227028483,0,0,0.985326475791887,0,3.10992173311158,7.92659743793288,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,7.29742683847143,3.51579964002488,6.32501818449095,0,0,0,0,0,0,0.112085143993527,33.8892907547315,3.66566877261179,30.5456426345801,0,0,0,0.167516265334349,0,39.6973722692007,26.9245313283622,45.5857064779639,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,81.6733703185405,249.365616146321,288.591316300513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0.764628819135115,0.831076008928724,0,1.31555925987561,0.522870902049801,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.596586391912706,0,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,3.17020642346017,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,5.26699946769575,0,0.286822704408103,0,0.35667105148125,0,1.47775344708365,0,0,0,0,5.3624182042863,0,0.470719003883896,0.43050537267123,0,0,0.229723400206959,7.10426652925037,3.82318603571188,2.84823593587081,3.09701308095126,2.05681136543097,12.3209929126616,6.48037724685738,3.17250070517708,0,0,0,0.371606350251437,0,0,0,2.3949524571938,1.53204296105893,2.54008299268659,0.324621940274555,1.12318871245384,4.10822422259746,0.47003968731907,2.50634477090067,1.35433422241283,6.42352300414798,6.65939033730457,12.7753871307098,6.18309620560377,3.07240764308458,4.2498460499559,4.50492682622153,3.12620952643264,0,0,0,2.66457574398256,0,0,1.02555725490326,0,0,0.568272293612826,0,1.18785872333055,0,0,0.562677665642051,0.556543525114529,0,0,2.78947183551498,1.65770349318689,0,0,0,0,0.629078458031288,0,8.69673029385682,0.789147245095469,11.974154617347,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.482385754501632,1.52581736317083,0,0,0,0,0,0.538651809526579,0.683652335082007,0,0,0,0.638002319463839,0,0,1.02193298195737,1.09886179476517,0,0,0,0,0,0.158936578980379,0.632994193584081,0,0,0,0,0,0,0,0,0,1.14581926067151,0.802577647298789,0.937057782901357,0,0,0,0,0,0,4.92855321102206,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0.225980740780532,0.411125773940253,0.794858446811959,0.316553979779393,0,0.0801588202515337,3.41524791582964,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,1.80126086612937,0,3.83239764200917,0,0,0.837847203816763,0.229160424011684,2.15361907373044,0.599037001496973,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0.254019996197353,0,0.408610218334727,0,0,0,3.37460837327251,0.77380195455795,0.425246896606173,0,0.315222829196793,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0.453248366080503,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,3.09683496446315,1.25763444079733,1.24271716604159,0.992332043623902,0.197611631897944,0,0,1.08803560673895,4.0110383043632,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| ||
|short_description=p1@NLRP3 | |short_description=p1@NLRP3 | ||
}} | }} |
Latest revision as of 23:54, 16 September 2015
Short description: | p1@NLRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLRP3_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 10bp_to_ENST00000366497, ENST00000391828, NM_001079821, NM_001127461, uc001icr.2, uc001ics.2_5end |
EntrezGene: | NLRP3 |
HGNC: | 16400 |
UniProt: | Q96P20B2RC97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.48e-60 | 98 |
blood island | 4.48e-60 | 98 |
bone marrow | 6.21e-55 | 76 |
hemolymphoid system | 2.55e-52 | 108 |
bone element | 1.92e-49 | 82 |
skeletal element | 2.85e-43 | 90 |
immune system | 3.10e-41 | 93 |
skeletal system | 2.52e-38 | 100 |
lateral plate mesoderm | 6.98e-23 | 203 |
connective tissue | 4.62e-20 | 371 |
musculoskeletal system | 1.10e-17 | 167 |
blood | 1.39e-11 | 15 |
haemolymphatic fluid | 1.39e-11 | 15 |
organism substance | 1.39e-11 | 15 |
mesoderm | 6.19e-09 | 315 |
mesoderm-derived structure | 6.19e-09 | 315 |
presumptive mesoderm | 6.19e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.43e-09 | 31 |
leukemia | 5.91e-07 | 39 |