FFCP PHASE1:Hg19::chr1:246350240..246350281,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246350240..246350281,- | |||
|coexpression_cluster_id=C431 | |coexpression_cluster_id=C431 | ||
|description=CAGE_peak_at_chr1:246350240..246350281,- | |description=CAGE_peak_at_chr1:246350240..246350281,- | ||
|id=chr1:246350240..246350281,- | |id=chr1:246350240..246350281,- | ||
|ontology_enrichment_celltype=CL:0002274!7.26e-15!5;CL:0000457!7.26e-15!5;CL:0002191!7.26e-15!5;CL:0000097!7.26e-15!5;CL:0000831!7.26e-15!5;CL:0002028!7.26e-15!5;CL:0000763!8.61e-14!112;CL:0000049!8.61e-14!112;CL:0000163!4.42e-08!9;CL:0000037!6.26e-08!172;CL:0000566!6.26e-08!172;CL:0002032!7.93e-08!165;CL:0000837!7.93e-08!165;CL:0001014!2.15e-07!2;CL:0001016!2.15e-07!2;CL:0000988!4.12e-07!182 | |ontology_enrichment_celltype=CL:0002274!7.26e-15!5;CL:0000457!7.26e-15!5;CL:0002191!7.26e-15!5;CL:0000097!7.26e-15!5;CL:0000831!7.26e-15!5;CL:0002028!7.26e-15!5;CL:0000763!8.61e-14!112;CL:0000049!8.61e-14!112;CL:0000163!4.42e-08!9;CL:0000037!6.26e-08!172;CL:0000566!6.26e-08!172;CL:0002032!7.93e-08!165;CL:0000837!7.93e-08!165;CL:0001014!2.15e-07!2;CL:0001016!2.15e-07!2;CL:0000988!4.12e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.48e-16;2!CL:0001016;4.48e-16;2!CL:0000097;1.57e-13;5!CL:0000763;1.56e-11;100!CL:0000163;9.56e-08;9!CL:0000453;5.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.19e-29,108;CL:0000049,2.19e-29,108;CL:0002032,1.72e-18,161;CL:0000837,1.72e-18,161;CL:0000037,1.46e-17,168;CL:0000988,1.79e-16,177;CL:0001014,4.31e-16,2;CL:0001016,4.31e-16,2;CL:0000097,1.26e-13,5;CL:0002028,1.26e-13,5;CL:0000163,8.50e-08,9;CL:0000453,5.91e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000049;4.49e-09;108!UBERON:0006242;1.78e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!5.42e-32!31;DOID:1240!7.31e-27!39;DOID:2531!3.31e-19!51;DOID:0060083!3.31e-19!51;DOID:1036!1.97e-13!8 | |ontology_enrichment_disease=DOID:8692!5.42e-32!31;DOID:1240!7.31e-27!39;DOID:2531!3.31e-19!51;DOID:0060083!3.31e-19!51;DOID:1036!1.97e-13!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.22e-63;31!DOID:1240;5.74e-42;39!DOID:2531;2.69e-24;51!DOID:0060083;2.69e-24;51!DOID:1036;6.27e-23;8!DOID:225;1.78e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.07e-67,31;DOID:1240,1.39e-52,39;DOID:2531,1.77e-39,51;DOID:0060083,1.77e-39,51;DOID:1036,6.56e-23,8;DOID:0050686,1.44e-12,137;DOID:225,1.91e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.78e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.22e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,1.67292024625129,0.621984346622316,1.44119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1406913720271,140.564941677157,6.35020748171649,0,11.5126843026518,0,0,5.01268954180134,20.6535968917956,0,0,31.5126215890841,0,11.6751490437214,13.6442425814374,10.3446467861383,0,0,6.15436994738562,38.9456177005416,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.627921025580099,0.831058409500782,5.63989151542952,4.50943828930801,5.87375554415449,0,1.11255605286265,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.348799011369,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4482836518837,0,0,0,0,0,0,0,0,0.854299300541557,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.231522474323834,0,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,1.1001729976458,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,1.67292024625129,0.621984346622316,1.44119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1406913720271,140.564941677157,6.35020748171649,0,11.5126843026518,0,0,5.01268954180134,20.6535968917956,0,0,31.5126215890841,0,11.6751490437214,13.6442425814374,10.3446467861383,0,0,6.15436994738562,38.9456177005416,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.627921025580099,0.831058409500782,5.63989151542952,4.50943828930801,5.87375554415449,0,1.11255605286265,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.348799011369,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4482836518837,0,0,0,0,0,0,0,0,0.854299300541557,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.231522474323834,0,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0,0,0,0,1.1001729976458,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:246350240..246350281,- | |short_description=p@chr1:246350240..246350281,- | ||
}} | }} |
Latest revision as of 06:04, 28 July 2015
Short description: | p@chr1:246350240..246350281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246350240..246350281, - |
Coexpression cluster: | C431_acute_leukemia_Mast_leiomyoblastoma_chronic_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.19e-29 | 108 |
common myeloid progenitor | 2.19e-29 | 108 |
hematopoietic oligopotent progenitor cell | 1.72e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-18 | 161 |
hematopoietic stem cell | 1.46e-17 | 168 |
hematopoietic cell | 1.79e-16 | 177 |
CD1a-positive Langerhans cell | 4.31e-16 | 2 |
immature CD1a-positive Langerhans cell | 4.31e-16 | 2 |
mast cell | 1.26e-13 | 5 |
basophil mast progenitor cell | 1.26e-13 | 5 |
endocrine cell | 8.50e-08 | 9 |
Langerhans cell | 5.91e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.07e-67 | 31 |
leukemia | 1.39e-52 | 39 |
hematologic cancer | 1.77e-39 | 51 |
immune system cancer | 1.77e-39 | 51 |
chronic leukemia | 6.56e-23 | 8 |
organ system cancer | 1.44e-12 | 137 |
syndrome | 1.91e-08 | 1 |