FFCP PHASE1:Hg19::chr1:236082498..236082537,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236082498..236082537,- | |||
|coexpression_cluster_id=C1647 | |coexpression_cluster_id=C1647 | ||
|description=CAGE_peak_at_chr1:236082498..236082537,- | |description=CAGE_peak_at_chr1:236082498..236082537,- | ||
|id=chr1:236082498..236082537,- | |id=chr1:236082498..236082537,- | ||
|ontology_enrichment_celltype=CL:0000766!2.23e-43!76;CL:0002057!1.93e-38!42;CL:0000839!4.38e-38!70;CL:0000557!1.87e-37!71;CL:0000860!1.68e-35!45;CL:0002194!1.76e-33!63;CL:0000576!1.76e-33!63;CL:0000040!1.76e-33!63;CL:0000559!1.76e-33!63;CL:0002009!2.88e-32!65;CL:0000763!5.19e-27!112;CL:0000049!5.19e-27!112;CL:0000738!3.46e-23!140;CL:0002031!5.32e-20!124;CL:0000988!9.05e-20!182;CL:0000148!7.81e-19!10;CL:0000541!7.81e-19!10;CL:0000037!1.14e-18!172;CL:0000566!1.14e-18!172;CL:0002087!1.12e-17!119;CL:0002032!4.04e-17!165;CL:0000837!4.04e-17!165;CL:0002567!2.66e-13!3;CL:0000147!3.80e-13!14;CL:0000767!5.66e-13!3;CL:0000710!1.75e-11!20;CL:0000219!2.19e-11!390;CL:0002393!1.10e-10!9;CL:0002397!1.10e-10!9;CL:0000075!3.79e-08!27;CL:0002274!5.13e-08!5;CL:0000457!5.13e-08!5;CL:0002191!5.13e-08!5;CL:0000097!5.13e-08!5;CL:0000831!5.13e-08!5;CL:0002028!5.13e-08!5;CL:0002320!1.97e-07!365;CL:0000134!4.16e-07!358 | |ontology_enrichment_celltype=CL:0000766!2.23e-43!76;CL:0002057!1.93e-38!42;CL:0000839!4.38e-38!70;CL:0000557!1.87e-37!71;CL:0000860!1.68e-35!45;CL:0002194!1.76e-33!63;CL:0000576!1.76e-33!63;CL:0000040!1.76e-33!63;CL:0000559!1.76e-33!63;CL:0002009!2.88e-32!65;CL:0000763!5.19e-27!112;CL:0000049!5.19e-27!112;CL:0000738!3.46e-23!140;CL:0002031!5.32e-20!124;CL:0000988!9.05e-20!182;CL:0000148!7.81e-19!10;CL:0000541!7.81e-19!10;CL:0000037!1.14e-18!172;CL:0000566!1.14e-18!172;CL:0002087!1.12e-17!119;CL:0002032!4.04e-17!165;CL:0000837!4.04e-17!165;CL:0002567!2.66e-13!3;CL:0000147!3.80e-13!14;CL:0000767!5.66e-13!3;CL:0000710!1.75e-11!20;CL:0000219!2.19e-11!390;CL:0002393!1.10e-10!9;CL:0002397!1.10e-10!9;CL:0000075!3.79e-08!27;CL:0002274!5.13e-08!5;CL:0000457!5.13e-08!5;CL:0002191!5.13e-08!5;CL:0000097!5.13e-08!5;CL:0000831!5.13e-08!5;CL:0002028!5.13e-08!5;CL:0002320!1.97e-07!365;CL:0000134!4.16e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002567;8.83e-35;3!CL:0000767;1.25e-33;3!CL:0000097;9.23e-21;5!CL:0000148;2.68e-18;10!CL:0002393;2.25e-17;6!CL:0002397;2.25e-17;6!CL:0000147;3.79e-13;14!CL:0000766;4.16e-13;69!CL:0000094;4.95e-13;8!CL:0000163;8.29e-12;9!CL:0000081;1.25e-09;11!CL:0000710;2.88e-09;20!CL:0000576;1.10e-08;48!CL:0000860;1.69e-07;33!CL:0002057;1.69e-07;33!CL:0000075;6.63e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,8.84e-35,3;CL:0000767,7.56e-34,3;CL:0000766,1.33e-27,72;CL:0000097,7.81e-21,5;CL:0002028,7.81e-21,5;CL:0000839,2.38e-18,66;CL:0000148,2.74e-18,10;CL:0000541,2.74e-18,10;CL:0000557,4.66e-18,67;CL:0000763,7.24e-18,108;CL:0000049,7.24e-18,108;CL:0000860,9.13e-16,42;CL:0002057,9.13e-16,42;CL:0000738,8.13e-14,136;CL:0000473,1.09e-13,48;CL:0000234,1.09e-13,48;CL:0000147,3.85e-13,14;CL:0000094,4.11e-13,8;CL:0000163,7.57e-12,9;CL:0002393,9.09e-12,9;CL:0002397,9.09e-12,9;CL:0002032,2.24e-11,161;CL:0000837,2.24e-11,161;CL:0000037,8.06e-11,168;CL:0002194,8.87e-11,59;CL:0000576,8.87e-11,59;CL:0000040,8.87e-11,59;CL:0000559,8.87e-11,59;CL:0002009,2.11e-10,61;CL:0000988,3.60e-10,177;CL:0000081,1.09e-09,11;CL:0002031,1.74e-09,120;CL:0000710,2.92e-09,20;CL:0000219,5.99e-07,386;CL:0000075,6.69e-07,27 | |||
|ontology_enrichment_development_v019=CL:0002057;3.62e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.55e-37!80;UBERON:0001474!2.07e-34!86;UBERON:0002390!5.70e-30!102;UBERON:0003061!5.70e-30!102;UBERON:0004765!3.26e-28!101;UBERON:0001434!3.26e-28!101;UBERON:0002193!1.28e-26!112;UBERON:0002405!7.03e-24!115;UBERON:0002204!2.62e-15!167;UBERON:0003081!4.54e-11!216;UBERON:0002384!5.30e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.55e-37!80;UBERON:0001474!2.07e-34!86;UBERON:0002390!5.70e-30!102;UBERON:0003061!5.70e-30!102;UBERON:0004765!3.26e-28!101;UBERON:0001434!3.26e-28!101;UBERON:0002193!1.28e-26!112;UBERON:0002405!7.03e-24!115;UBERON:0002204!2.62e-15!167;UBERON:0003081!4.54e-11!216;UBERON:0002384!5.30e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.93e-16,76;UBERON:0001474,1.58e-14,82;UBERON:0004765,4.06e-13,90;UBERON:0002405,1.19e-12,93;UBERON:0002390,6.18e-12,98;UBERON:0003061,6.18e-12,98;UBERON:0001434,1.14e-11,100;UBERON:0002193,1.06e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,0,0,0,0,0,0.293600439334847,2.21598163412751,3.00816671205213,2.38711957787437,0,0,0,0.436194716338694,0,0,1.16214518452842,1.23350366406548,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,1.29096936716765,0,0.564727018627814,0,0.674170453335254,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0,0,0,0,1.0429658368404,0,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0,0,0,0,0,0,0,0,0,10.1590776614978,1.44119953416961,9.72066737383126,0.507983154337352,8.78573378784039,15.2382681373061,13.6857956818164,1.23392991243988,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,0,0,0,0,0,0.293600439334847,2.21598163412751,3.00816671205213,2.38711957787437,0,0,0,0.436194716338694,0,0,1.16214518452842,1.23350366406548,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,0.689491361473237,1.29096936716765,0,0.564727018627814,0,0.674170453335254,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0,0,0,0,1.0429658368404,0,0,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0,0,0,0,0,0,0,0,0,10.1590776614978,1.44119953416961,9.72066737383126,0.507983154337352,8.78573378784039,15.2382681373061,13.6857956818164,1.23392991243988,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:236082498..236082537,- | |short_description=p@chr1:236082498..236082537,- | ||
}} | }} |
Latest revision as of 05:24, 28 July 2015
Short description: | p@chr1:236082498..236082537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236082498..236082537, - |
Coexpression cluster: | C1647_Melanocyte_Mast_optic_Basophils_CD14_brain_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.93e-16 | 76 |
bone element | 1.58e-14 | 82 |
skeletal element | 4.06e-13 | 90 |
immune system | 1.19e-12 | 93 |
hematopoietic system | 6.18e-12 | 98 |
blood island | 6.18e-12 | 98 |
skeletal system | 1.14e-11 | 100 |
hemolymphoid system | 1.06e-10 | 108 |