FFCP PHASE1:Hg19::chr1:236046908..236046924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468107_5end | |association_with_transcript=0bp_to_ENST00000468107_5end | ||
|cluster_id=chr1:236046908..236046924,- | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_10_at_LYST_5end | |description=CAGE_peak_10_at_LYST_5end | ||
|id=chr1:236046908..236046924,- | |id=chr1:236046908..236046924,- | ||
|ontology_enrichment_celltype=CL:0000148!9.73e-10!10;CL:0000541!9.73e-10!10 | |ontology_enrichment_celltype=CL:0000148!9.73e-10!10;CL:0000541!9.73e-10!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.67e-59;10!CL:0000147;1.56e-42;14!CL:0000710;8.78e-30;20!CL:0002567;3.29e-23;3!CL:0000075;4.72e-22;27!CL:0002566;6.23e-18;1!CL:0002077;1.99e-16;34!CL:0000840;7.48e-12;5!CL:0000047;1.71e-09;2!CL:0000990;3.30e-08;8!CL:0000451;7.15e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.67e-59,10;CL:0000541,1.67e-59,10;CL:0000147,1.56e-42,14;CL:0000710,8.78e-30,20;CL:0002567,3.29e-23,3;CL:0000075,4.72e-22,27;CL:0002566,6.23e-18,1;CL:0002077,1.71e-17,34;CL:0000333,8.37e-14,41;CL:0000133,5.49e-13,59;CL:0000840,7.48e-12,5;CL:0001029,7.48e-12,5;CL:0000221,1.23e-10,72;CL:0000990,3.30e-08,8;CL:0000451,7.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000133;6.43e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!9.78e-07!2 | |ontology_enrichment_disease=DOID:1909!9.78e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.29e-34;2!DOID:6193;1.22e-17;1!DOID:3350;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.06e-34,2;DOID:6193,1.70e-17,1;DOID:3350,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-26!115;UBERON:0001049!9.15e-24!57;UBERON:0005068!9.15e-24!57;UBERON:0006241!9.15e-24!57;UBERON:0007135!9.15e-24!57;UBERON:0005743!1.00e-21!86;UBERON:0001017!1.54e-21!82;UBERON:0002616!5.53e-19!59;UBERON:0000073!7.45e-19!94;UBERON:0001016!7.45e-19!94;UBERON:0003075!7.74e-19!86;UBERON:0007284!7.74e-19!86;UBERON:0000955!5.59e-18!69;UBERON:0006238!5.59e-18!69;UBERON:0002346!1.24e-17!90;UBERON:0003080!1.64e-14!42;UBERON:0004121!4.25e-14!169;UBERON:0002298!5.28e-14!8;UBERON:0000924!1.57e-13!173;UBERON:0006601!1.57e-13!173;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0000033!2.34e-11!123;UBERON:0003076!3.99e-11!15;UBERON:0003057!3.99e-11!15;UBERON:0000153!1.81e-10!129;UBERON:0007811!1.81e-10!129;UBERON:0003056!8.19e-10!61;UBERON:0002020!2.03e-09!34;UBERON:0003528!2.03e-09!34;UBERON:0001893!2.63e-09!34;UBERON:0004733!1.44e-08!12;UBERON:0002028!1.44e-08!12;UBERON:0007277!1.44e-08!12;UBERON:0002791!3.36e-08!33;UBERON:0006331!5.52e-08!3;UBERON:0004732!7.88e-08!13;UBERON:0000988!9.83e-08!3;UBERON:0001869!3.69e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.52e-26!115;UBERON:0001049!9.15e-24!57;UBERON:0005068!9.15e-24!57;UBERON:0006241!9.15e-24!57;UBERON:0007135!9.15e-24!57;UBERON:0005743!1.00e-21!86;UBERON:0001017!1.54e-21!82;UBERON:0002616!5.53e-19!59;UBERON:0000073!7.45e-19!94;UBERON:0001016!7.45e-19!94;UBERON:0003075!7.74e-19!86;UBERON:0007284!7.74e-19!86;UBERON:0000955!5.59e-18!69;UBERON:0006238!5.59e-18!69;UBERON:0002346!1.24e-17!90;UBERON:0003080!1.64e-14!42;UBERON:0004121!4.25e-14!169;UBERON:0002298!5.28e-14!8;UBERON:0000924!1.57e-13!173;UBERON:0006601!1.57e-13!173;UBERON:0002780!4.11e-13!41;UBERON:0001890!4.11e-13!41;UBERON:0006240!4.11e-13!41;UBERON:0000033!2.34e-11!123;UBERON:0003076!3.99e-11!15;UBERON:0003057!3.99e-11!15;UBERON:0000153!1.81e-10!129;UBERON:0007811!1.81e-10!129;UBERON:0003056!8.19e-10!61;UBERON:0002020!2.03e-09!34;UBERON:0003528!2.03e-09!34;UBERON:0001893!2.63e-09!34;UBERON:0004733!1.44e-08!12;UBERON:0002028!1.44e-08!12;UBERON:0007277!1.44e-08!12;UBERON:0002791!3.36e-08!33;UBERON:0006331!5.52e-08!3;UBERON:0004732!7.88e-08!13;UBERON:0000988!9.83e-08!3;UBERON:0001869!3.69e-07!32 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p10@LYST | |short_description=p10@LYST | ||
}} | }} |
Latest revision as of 13:28, 16 September 2015
Short description: | p10@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LYST_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 0bp_to_ENST00000468107_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-59 | 10 |
melanoblast | 1.67e-59 | 10 |
pigment cell | 1.56e-42 | 14 |
neurecto-epithelial cell | 8.78e-30 | 20 |
light melanocyte | 3.29e-23 | 3 |
columnar/cuboidal epithelial cell | 4.72e-22 | 27 |
dark melanocyte | 6.23e-18 | 1 |
ecto-epithelial cell | 1.71e-17 | 34 |
migratory neural crest cell | 8.37e-14 | 41 |
neurectodermal cell | 5.49e-13 | 59 |
immature conventional dendritic cell | 7.48e-12 | 5 |
common dendritic progenitor | 7.48e-12 | 5 |
ectodermal cell | 1.23e-10 | 72 |
conventional dendritic cell | 3.30e-08 | 8 |
dendritic cell | 7.15e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.06e-34 | 2 |
epithelioid sarcoma | 1.70e-17 | 1 |
mesenchymal cell neoplasm | 2.02e-09 | 2 |