FFCP PHASE1:Hg19::chr1:236046760..236046770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1130 | |EntrezGene=1130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |HGNC=1968 | ||
|TSSclassifier=strong | |||
|UniProt=F5H074 | |UniProt=F5H074 | ||
|association_with_transcript=101bp_to_ENST00000536965_5end | |association_with_transcript=101bp_to_ENST00000536965_5end | ||
|cluster_id=chr1:236046760..236046770,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_13_at_LYST_5end | |description=CAGE_peak_13_at_LYST_5end | ||
|id=chr1:236046760..236046770,- | |id=chr1:236046760..236046770,- | ||
|ontology_enrichment_celltype=CL:0000148!3.12e-20!10;CL:0000541!3.12e-20!10;CL:0000147!3.88e-14!14;CL:0002567!1.07e-13!3;CL:0000990!3.98e-11!8;CL:0000710!1.45e-09!20;CL:0000451!4.84e-09!10;CL:0000453!4.03e-08!5;CL:0002077!7.00e-07!33;CL:0000075!8.34e-07!27 | |ontology_enrichment_celltype=CL:0000148!3.12e-20!10;CL:0000541!3.12e-20!10;CL:0000147!3.88e-14!14;CL:0002567!1.07e-13!3;CL:0000990!3.98e-11!8;CL:0000710!1.45e-09!20;CL:0000451!4.84e-09!10;CL:0000453!4.03e-08!5;CL:0002077!7.00e-07!33;CL:0000075!8.34e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.04e-69;10!CL:0000147;1.58e-49;14!CL:0002567;7.46e-44;3!CL:0000710;1.37e-34;20!CL:0000453;9.67e-26;5!CL:0000075;1.55e-25;27!CL:0002077;7.50e-18;34!CL:0002566;1.44e-15;1!CL:0000222;3.17e-15;1!CL:0000990;1.29e-14;8!CL:0000451;4.51e-12;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.26e-69,10;CL:0000541,2.26e-69,10;CL:0000147,1.70e-49,14;CL:0002567,6.94e-44,3;CL:0000710,1.44e-34,20;CL:0000453,9.27e-26,5;CL:0000075,1.61e-25,27;CL:0002077,3.47e-20,34;CL:0000333,7.18e-16,41;CL:0002566,1.54e-15,1;CL:0000990,1.26e-14,8;CL:0000451,4.42e-12,10;CL:0000133,4.82e-11,59;CL:0000221,5.21e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.41e-09!2 | |ontology_enrichment_disease=DOID:1909!1.41e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.38e-29;2!DOID:0060060;2.06e-15;1!DOID:0060061;2.06e-15;1!DOID:8691;2.06e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2;DOID:0060060,2.38e-15,1;DOID:0060061,2.38e-15,1;DOID:8691,2.38e-15,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p13@LYST | |short_description=p13@LYST | ||
}} | }} |
Latest revision as of 13:23, 16 September 2015
Short description: | p13@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LYST_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 101bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.26e-69 | 10 |
melanoblast | 2.26e-69 | 10 |
pigment cell | 1.70e-49 | 14 |
light melanocyte | 6.94e-44 | 3 |
neurecto-epithelial cell | 1.44e-34 | 20 |
Langerhans cell | 9.27e-26 | 5 |
columnar/cuboidal epithelial cell | 1.61e-25 | 27 |
ecto-epithelial cell | 3.47e-20 | 34 |
migratory neural crest cell | 7.18e-16 | 41 |
dark melanocyte | 1.54e-15 | 1 |
conventional dendritic cell | 1.26e-14 | 8 |
dendritic cell | 4.42e-12 | 10 |
neurectodermal cell | 4.82e-11 | 59 |
ectodermal cell | 5.21e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-29 | 2 |
non-Hodgkin lymphoma | 2.38e-15 | 1 |
cutaneous T cell lymphoma | 2.38e-15 | 1 |
mycosis fungoides | 2.38e-15 | 1 |