FFCP PHASE1:Hg19::chr1:23430065..23430077,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:23430065..23430077,+ | |||
|coexpression_cluster_id=C662 | |coexpression_cluster_id=C662 | ||
|description=CAGE_peak_at_chr1:23430065..23430077,+ | |description=CAGE_peak_at_chr1:23430065..23430077,+ | ||
|id=chr1:23430065..23430077,+ | |id=chr1:23430065..23430077,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.93e-15!18;CL:0000789!4.93e-15!18;CL:0002420!4.93e-15!18;CL:0002419!4.93e-15!18;CL:0000790!4.93e-15!18;CL:0000084!9.90e-13!25;CL:0000827!9.90e-13!25;CL:0000625!1.72e-12!11;CL:0000988!2.27e-12!182;CL:0000037!2.39e-11!172;CL:0000566!2.39e-11!172;CL:0002032!2.38e-10!165;CL:0000837!2.38e-10!165;CL:0000738!8.59e-10!140;CL:0002274!6.64e-09!5;CL:0000457!6.64e-09!5;CL:0002191!6.64e-09!5;CL:0000097!6.64e-09!5;CL:0000831!6.64e-09!5;CL:0002028!6.64e-09!5;CL:0000080!9.50e-09!6;CL:0002031!2.16e-07!124 | |ontology_enrichment_celltype=CL:0000791!4.93e-15!18;CL:0000789!4.93e-15!18;CL:0002420!4.93e-15!18;CL:0002419!4.93e-15!18;CL:0000790!4.93e-15!18;CL:0000084!9.90e-13!25;CL:0000827!9.90e-13!25;CL:0000625!1.72e-12!11;CL:0000988!2.27e-12!182;CL:0000037!2.39e-11!172;CL:0000566!2.39e-11!172;CL:0002032!2.38e-10!165;CL:0000837!2.38e-10!165;CL:0000738!8.59e-10!140;CL:0002274!6.64e-09!5;CL:0000457!6.64e-09!5;CL:0002191!6.64e-09!5;CL:0000097!6.64e-09!5;CL:0000831!6.64e-09!5;CL:0002028!6.64e-09!5;CL:0000080!9.50e-09!6;CL:0002031!2.16e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.46e-18;5!CL:0000623;5.51e-18;3!CL:0000094;5.99e-11;8!CL:0000163;2.31e-10;9!CL:0000767;2.89e-08;3!CL:0000625;4.81e-08;11!CL:0000081;5.43e-08;11!CL:0000226;5.84e-08;3!CL:0000842;5.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.37e-18,5;CL:0002028,1.37e-18,5;CL:0000623,5.22e-18,3;CL:0000825,5.22e-18,3;CL:0000094,4.79e-11,8;CL:0000163,2.23e-10,9;CL:0000738,3.09e-10,136;CL:0000037,1.28e-09,168;CL:0000988,6.57e-09,177;CL:0000767,2.37e-08,3;CL:0000081,4.64e-08,11;CL:0002032,4.65e-08,161;CL:0000837,4.65e-08,161;CL:0000625,5.00e-08,11;CL:0000226,8.04e-08,3;CL:0000842,8.04e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.63e-12!15;UBERON:0000179!1.63e-12!15;UBERON:0000463!1.63e-12!15;UBERON:0002390!9.89e-07!102;UBERON:0003061!9.89e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!1.63e-12!15;UBERON:0000179!1.63e-12!15;UBERON:0000463!1.63e-12!15;UBERON:0002390!9.89e-07!102;UBERON:0003061!9.89e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.08e-08;15!UBERON:0000179;1.08e-08;15!UBERON:0000463;1.08e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.46e-08,15;UBERON:0000179,1.46e-08,15;UBERON:0000463,1.46e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,3.0706351847777,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,1.40381113229099,1.08505435357926,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,2.00623794468814,0.32592226663359,0.946895611469467,0,3.45372416344038,0.294605907474837,1.99380505125259,3.24964636518019,3.71464827204458,4.81219585971549,2.30213066445147,5.52700035571697,2.31842468588042,0,0,0,1.47302145506836,0.383220493601921,1.37450978193052,1.51811815211702,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,2.49861453104692,0.947109008176067,0.821127996921047,2.01606743224732,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,7.8826118063351,5.37095447480679,0.829312462163088,2.16179930125442,2.5248486685276,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,4.13764596424047,4.31255149719035,3.85029108839245,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0.43050537267123,0,0,0,1.01489521846434,0.764637207142375,0,0.952927101831156,2.46817363851717,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.664846727600626,0,0,0.167821586975843,0,1.27149263184303,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0,0.941798755221676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,3.0706351847777,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,1.40381113229099,1.08505435357926,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,2.00623794468814,0.32592226663359,0.946895611469467,0,3.45372416344038,0.294605907474837,1.99380505125259,3.24964636518019,3.71464827204458,4.81219585971549,2.30213066445147,5.52700035571697,2.31842468588042,0,0,0,1.47302145506836,0.383220493601921,1.37450978193052,1.51811815211702,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,2.49861453104692,0.947109008176067,0.821127996921047,2.01606743224732,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,7.8826118063351,5.37095447480679,0.829312462163088,2.16179930125442,2.5248486685276,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,4.13764596424047,4.31255149719035,3.85029108839245,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0.43050537267123,0,0,0,1.01489521846434,0.764637207142375,0,0.952927101831156,2.46817363851717,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0.664846727600626,0,0,0.167821586975843,0,1.27149263184303,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0,0.941798755221676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr1:23430065..23430077,+ | |short_description=p@chr1:23430065..23430077,+ | ||
}} | }} |
Latest revision as of 05:08, 28 July 2015
Short description: | p@chr1:23430065..23430077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:23430065..23430077, + |
Coexpression cluster: | C662_Mast_CD8_Natural_Basophils_CD4_Peripheral_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.37e-18 | 5 |
basophil mast progenitor cell | 1.37e-18 | 5 |
natural killer cell | 5.22e-18 | 3 |
pro-NK cell | 5.22e-18 | 3 |
granulocyte | 4.79e-11 | 8 |
endocrine cell | 2.23e-10 | 9 |
leukocyte | 3.09e-10 | 136 |
hematopoietic stem cell | 1.28e-09 | 168 |
hematopoietic cell | 6.57e-09 | 177 |
basophil | 2.37e-08 | 3 |
blood cell | 4.64e-08 | 11 |
hematopoietic oligopotent progenitor cell | 4.65e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.65e-08 | 161 |
CD8-positive, alpha-beta T cell | 5.00e-08 | 11 |
single nucleate cell | 8.04e-08 | 3 |
mononuclear cell | 8.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.46e-08 | 15 |
haemolymphatic fluid | 1.46e-08 | 15 |
organism substance | 1.46e-08 | 15 |