FFCP PHASE1:Hg19::chr19:10389255..10389259,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:10389255..10389259,+
|short_description=p@chr19:10389255..10389259,+
|description=CAGE_peak_at_chr19:10389255..10389259,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:10389255..10389259,+ | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr19:10389255..10389259,+ | |||
|id=chr19:10389255..10389259,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.56e-37!76;CL:0000738!5.25e-35!140;CL:0000557!1.41e-29!71;CL:0000839!4.54e-29!70;CL:0002194!6.88e-29!63;CL:0000576!6.88e-29!63;CL:0000040!6.88e-29!63;CL:0000559!6.88e-29!63;CL:0002009!1.53e-28!65;CL:0000860!2.51e-28!45;CL:0002057!9.22e-28!42;CL:0000037!6.83e-27!172;CL:0000566!6.83e-27!172;CL:0002087!7.50e-27!119;CL:0000988!1.32e-26!182;CL:0002031!3.58e-25!124;CL:0002032!6.96e-25!165;CL:0000837!6.96e-25!165;CL:0000763!1.09e-24!112;CL:0000049!1.09e-24!112;CL:0000134!7.21e-08!358;CL:0000094!8.08e-08!8;CL:0002320!1.40e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.83e-47;33!CL:0002057;4.83e-47;33!CL:0000473;5.78e-39;39!CL:0000234;5.78e-39;39!CL:0000576;9.82e-29;48!CL:0000766;1.00e-26;69!CL:0000094;6.84e-17;8!CL:0000081;4.66e-15;11!CL:0002087;2.35e-14;104!CL:0000763;5.14e-13;100!CL:0000738;3.56e-12;136!CL:0000988;3.54e-09;177!CL:0002393;5.19e-09;6!CL:0002397;5.19e-09;6!CL:0000775;6.14e-08;3!CL:0000226;2.96e-07;3!CL:0000842;2.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.30e-61,72;CL:0000473,5.29e-55,48;CL:0000234,5.29e-55,48;CL:0000860,1.23e-54,42;CL:0002057,1.23e-54,42;CL:0000738,4.04e-54,136;CL:0000839,2.52e-45,66;CL:0000557,1.83e-44,67;CL:0002194,4.41e-44,59;CL:0000576,4.41e-44,59;CL:0000040,4.41e-44,59;CL:0000559,4.41e-44,59;CL:0000988,1.77e-43,177;CL:0002009,2.93e-42,61;CL:0000037,1.19e-41,168;CL:0002087,1.48e-41,115;CL:0002032,8.03e-38,161;CL:0000837,8.03e-38,161;CL:0002031,1.62e-37,120;CL:0000763,1.66e-37,108;CL:0000049,1.66e-37,108;CL:0000134,1.27e-17,354;CL:0002320,6.86e-17,361;CL:0000094,7.99e-17,8;CL:0000081,5.15e-15,11;CL:0000219,2.56e-14,386;CL:0000048,8.93e-12,427;CL:0000034,2.17e-11,441;CL:0000723,2.44e-11,433;CL:0000775,6.23e-08,3;CL:0000226,3.27e-07,3;CL:0000842,3.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-40;42!CL:0000049;3.63e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.42e-28!112;UBERON:0002390!3.23e-28!102;UBERON:0003061!3.23e-28!102;UBERON:0002405!1.20e-24!115;UBERON:0002371!2.41e-24!80;UBERON:0001474!8.41e-21!86;UBERON:0004765!5.90e-17!101;UBERON:0001434!5.90e-17!101;UBERON:0002204!2.09e-08!167;UBERON:0002384!2.57e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.20e-08;15!UBERON:0000179;8.20e-08;15!UBERON:0000463;8.20e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-44,98;UBERON:0003061,2.09e-44,98;UBERON:0002193,1.44e-40,108;UBERON:0002371,1.00e-37,76;UBERON:0001474,4.69e-34,82;UBERON:0002405,2.31e-33,93;UBERON:0004765,6.30e-30,90;UBERON:0001434,9.78e-29,100;UBERON:0003081,4.30e-18,203;UBERON:0002384,6.83e-16,371;UBERON:0002204,2.71e-12,167;UBERON:0000926,4.49e-08,315;UBERON:0004120,4.49e-08,315;UBERON:0006603,4.49e-08,315;UBERON:0000178,8.48e-08,15;UBERON:0000179,8.48e-08,15;UBERON:0000463,8.48e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,2.21598876669059,1.80621296789881,1.18066171970519,1.57345710739562,3.0706351847777,2.01260960310899,0,0,0,0.697204805222715,0.995184627411951,0,25.4837887924664,30.0816671205213,21.918097942301,0.895661896959697,0,0.77272670290256,1.01778767145695,0.377875943688809,0.727752183563449,4.18372266430232,3.70051099219643,2.16794459626573,22.7276989934499,12.2957139133968,5.20260905754887,9.3081333798887,5.16387746867061,13.5426486594342,4.51781614902251,3.27487380069415,2.47195832889593,15.9163624032869,5.1348644332175,5.75403413219137,4.61791820261403,5.18605509816243,3.40979800426155,11.6083695451434,5.10646702222026,6.85104473895132,12.3111845975804,10.9511412868242,3.9093992046921,11.502590550034,3.31449872388808,5.37986058649504,0.633765858935825,1.4882300997553,1.88692780957538,1.23561494261145,0.450530678524519,1.6072558669708,0,0,0.365328307529268,0,0,0,0,0,0,0,0,2.84606484554724,2.34894875748376,3.82273228125229,0,3.36305137788922,0,0.196709770113833,0,0.616804496998528,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.130059347559878,0.657751618414705,0.829050053357545,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,2.40696176205157,0.144824403882799,0,0,0,0,0,0,0,1.45990461090791,0,0.221729397462564,0,0.72038491523742,0,0,0.324547393654683,0.870648686496336,0.930705723632056,3.33886874027479,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,10.5424333948851,15.511210565933,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0.67355336034844,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,1.96565443335525,1.77236972004421,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,1.38895653772983,0.951270761172991,0,0,0.492434012174795,0.702012795417713,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.704387472105808,4.56121854189699,1.8735593944205,8.07951573928832,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0,0,0,1.56919201590938,2.56139988262505,1.72502059887614,2.43851768931522,0.254094624222463,0,0.773288812777695,0,0,16.478154526838,38.8909896965232,7.0450637284126,0.24538298343828,0.500170521059677,0,0.623912584592421,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,2.06768026122887,13.8057088523915,4.69601254335155,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.974853958525138,0,0,0.282810863907425,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,4.85547561184627,1.31717957183961,0,0.349934720244983,0.0962221127255121,0,0,1.03558180854457,0,0,0,0,0,0,1.70894156152249,0.952927101831156,1.23408681925858,0,0,0,0,0,0,1.30062222588003,0.28853842595289,0,0,0.199579371432817,0,0.635020748171649,0,0,1.36940807419915,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0.111308705022906,0.494411622680279,0,1.39473591775749,1.65770349318689,0.251932747854276,0,0.861593638227486,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.262379999988587,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0.21787692703798,0,0.230850775511391,1.25336261431701,0,0.0897576444097721,0,0,0,0,0,0,0.332423363800313,0.225595660617181,0,0.335643173951685,0,0.317873157960757,0.632994193584081,0,0,0,0,0.0884575645033392,0.611030144933625,8.89563386041866,8.40234784836219,8.56259985944734,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.387025325156341,0.219267951258557,0.246346371159628,0.0969890164884194,0,0.225980740780532,0,0.596143835108969,0,0.195551382734803,0.320635281006135,0.213452994739353,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0.273810757783986,0,0,1.05154941711726,2.23425921017803,0.229160424011684,5.0251111720377,0.798716001995964,2.57535628881943,0.446342914883745,0.268733889946905,0,0,0.551482276150566,0.247247575143499,0.202210631562555,0.0984274815147488,0.677386656526276,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0.77380195455795,0.060749556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| ||
|short_description=p@chr19:10389255..10389259,+ | |||
}} | }} |
Latest revision as of 02:55, 26 July 2015
Short description: | p@chr19:10389255..10389259, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10389255..10389259, + |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-44 | 98 |
blood island | 2.09e-44 | 98 |
hemolymphoid system | 1.44e-40 | 108 |
bone marrow | 1.00e-37 | 76 |
bone element | 4.69e-34 | 82 |
immune system | 2.31e-33 | 93 |
skeletal element | 6.30e-30 | 90 |
skeletal system | 9.78e-29 | 100 |
lateral plate mesoderm | 4.30e-18 | 203 |
connective tissue | 6.83e-16 | 371 |
musculoskeletal system | 2.71e-12 | 167 |
mesoderm | 4.49e-08 | 315 |
mesoderm-derived structure | 4.49e-08 | 315 |
presumptive mesoderm | 4.49e-08 | 315 |
blood | 8.48e-08 | 15 |
haemolymphatic fluid | 8.48e-08 | 15 |
organism substance | 8.48e-08 | 15 |