FFCP PHASE1:Hg19::chr1:183559626..183559637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=P19878 | |UniProt=P19878 | ||
|association_with_transcript=78bp_to_ENST00000367535_5end | |association_with_transcript=78bp_to_ENST00000367535_5end | ||
|cluster_id=chr1:183559626..183559637,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_2_at_NCF2_5end | |description=CAGE_peak_2_at_NCF2_5end | ||
|id=chr1:183559626..183559637,- | |id=chr1:183559626..183559637,- | ||
|ontology_enrichment_celltype=CL:0000738!2.43e-45!140;CL:0000766!4.43e-44!76;CL:0000037!2.35e-43!172;CL:0000566!2.35e-43!172;CL:0002009!6.08e-43!65;CL:0002194!1.27e-41!63;CL:0000576!1.27e-41!63;CL:0000040!1.27e-41!63;CL:0000559!1.27e-41!63;CL:0000988!1.18e-40!182;CL:0002032!1.50e-40!165;CL:0000837!1.50e-40!165;CL:0000763!1.70e-39!112;CL:0000049!1.70e-39!112;CL:0002087!2.85e-39!119;CL:0000557!1.14e-37!71;CL:0000839!2.07e-36!70;CL:0002057!1.82e-35!42;CL:0002031!2.82e-35!124;CL:0000860!1.33e-32!45;CL:0000094!5.60e-08!8;CL:0002393!8.38e-08!9;CL:0002397!8.38e-08!9 | |ontology_enrichment_celltype=CL:0000738!2.43e-45!140;CL:0000766!4.43e-44!76;CL:0000037!2.35e-43!172;CL:0000566!2.35e-43!172;CL:0002009!6.08e-43!65;CL:0002194!1.27e-41!63;CL:0000576!1.27e-41!63;CL:0000040!1.27e-41!63;CL:0000559!1.27e-41!63;CL:0000988!1.18e-40!182;CL:0002032!1.50e-40!165;CL:0000837!1.50e-40!165;CL:0000763!1.70e-39!112;CL:0000049!1.70e-39!112;CL:0002087!2.85e-39!119;CL:0000557!1.14e-37!71;CL:0000839!2.07e-36!70;CL:0002057!1.82e-35!42;CL:0002031!2.82e-35!124;CL:0000860!1.33e-32!45;CL:0000094!5.60e-08!8;CL:0002393!8.38e-08!9;CL:0002397!8.38e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.51e-40;33!CL:0002057;6.51e-40;33!CL:0000473;4.11e-39;39!CL:0000234;4.11e-39;39!CL:0000576;2.07e-37;48!CL:0000766;3.93e-29;69!CL:0002087;3.57e-17;104!CL:0000763;3.63e-17;100!CL:0000738;3.07e-15;136!CL:0000094;2.01e-11;8!CL:0000988;4.41e-10;177!CL:0000235;2.54e-08;6!CL:0002393;4.76e-08;6!CL:0002397;4.76e-08;6!CL:0000945;7.35e-08;24!CL:0000081;1.03e-07;11!CL:0000840;1.05e-07;5!CL:0000219;3.34e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.17e-72,72;CL:0002009,2.77e-70,61;CL:0002194,2.94e-68,59;CL:0000576,2.94e-68,59;CL:0000040,2.94e-68,59;CL:0000559,2.94e-68,59;CL:0000738,1.06e-65,136;CL:0000557,5.19e-62,67;CL:0000037,4.86e-61,168;CL:0000473,6.26e-61,48;CL:0000234,6.26e-61,48;CL:0002087,1.51e-60,115;CL:0000839,9.55e-59,66;CL:0002032,1.18e-57,161;CL:0000837,1.18e-57,161;CL:0000763,1.70e-57,108;CL:0000049,1.70e-57,108;CL:0000988,3.39e-56,177;CL:0002031,5.67e-55,120;CL:0000860,8.86e-54,42;CL:0002057,8.86e-54,42;CL:0000134,9.29e-14,354;CL:0002320,6.20e-13,361;CL:0000094,2.03e-11,8;CL:0002393,3.77e-11,9;CL:0002397,3.77e-11,9;CL:0000219,4.22e-10,386;CL:0000235,2.56e-08,6;CL:0000945,6.17e-08,24;CL:0000826,6.17e-08,24;CL:0000840,1.03e-07,5;CL:0001029,1.03e-07,5;CL:0000081,1.04e-07,11;CL:0000048,3.45e-07,427;CL:0000723,4.77e-07,433;CL:0000034,8.06e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-38;42!CL:0000049;1.69e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.33e-45!102;UBERON:0003061!6.33e-45!102;UBERON:0002193!6.28e-40!112;UBERON:0002371!1.29e-32!80;UBERON:0001474!2.84e-28!86;UBERON:0004765!4.81e-22!101;UBERON:0001434!4.81e-22!101;UBERON:0002405!1.58e-21!115;UBERON:0007023!4.30e-20!115;UBERON:0000178!7.84e-11!15;UBERON:0000179!7.84e-11!15;UBERON:0000463!7.84e-11!15;UBERON:0003081!1.51e-10!216 | |ontology_enrichment_uberon=UBERON:0002390!6.33e-45!102;UBERON:0003061!6.33e-45!102;UBERON:0002193!6.28e-40!112;UBERON:0002371!1.29e-32!80;UBERON:0001474!2.84e-28!86;UBERON:0004765!4.81e-22!101;UBERON:0001434!4.81e-22!101;UBERON:0002405!1.58e-21!115;UBERON:0007023!4.30e-20!115;UBERON:0000178!7.84e-11!15;UBERON:0000179!7.84e-11!15;UBERON:0000463!7.84e-11!15;UBERON:0003081!1.51e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-11;15!UBERON:0000179;2.40e-11;15!UBERON:0000463;2.40e-11;15!UBERON:0002390;3.73e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.92e-68,98;UBERON:0003061,9.92e-68,98;UBERON:0002193,2.66e-62,108;UBERON:0002371,1.30e-55,76;UBERON:0002405,5.91e-51,93;UBERON:0001474,6.76e-50,82;UBERON:0004765,5.24e-45,90;UBERON:0001434,2.88e-38,100;UBERON:0003081,5.40e-26,203;UBERON:0002204,5.00e-16,167;UBERON:0002384,2.56e-12,371;UBERON:0000178,2.41e-11,15;UBERON:0000179,2.41e-11,15;UBERON:0000463,2.41e-11,15;UBERON:0000926,1.02e-09,315;UBERON:0004120,1.02e-09,315;UBERON:0006603,1.02e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9836532518751,12.3150884174919,13.4595436046392,36.1895134700992,13.4340289334024,24.6157636072561,0,0.30120591877825,2.9580320813343,0,0,1.17440175733939,30.4697474692533,27.6751337508796,31.6835871245144,36.7221377753476,19.7575136271578,24.2121033576135,78.6604471797445,63.1052825960312,61.6163515417053,74.1448627729134,77.2995629481032,57.2956786155942,69.6215589419604,66.8579444040953,52.0260905754888,81.0152349731054,49.7023206359546,55.5248595036801,68.7084539330507,63.5871329634781,49.2144430934735,74.3783858461293,59.6927990361534,56.2616670703156,58.053828832862,77.3918991571932,67.7697353346984,112.601184587891,86.2425541530532,62.9050471485531,69.3446316108611,54.2342235157009,56.9034773127406,116.236704505607,94.6473524488041,69.3052628495537,36.5471645319659,38.2687739937078,43.8186569112506,54.3670574749036,54.9647427799913,55.7717785838868,28.5012743741249,26.8537514218772,24.4769966044609,0,1.09227722252426,1.77901850772711,3.41384178053206,2.00197993518006,1.14950487990897,3.96626923670917,0,0.569212969109448,1.76171156811282,1.52909291250092,0,3.36305137788922,0.790152254325231,0,0,0.822405995998037,1.67186495390678,0,0,0,1.00269411196656,0,0,0,0.384273959177026,1.1705341280389,0.657751618414705,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0.766440987203842,0,0.506039384039006,0.637130828648193,0,0,2.55977702432214,1.4078527226986,0,4.73554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.0956652079634,0,0,43.4893507497276,43.3583045875175,60.7617879571214,3.81584998888547,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.2462922052443,58.1670396222488,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,1.10581869652794,0,0,0,0,0,0,0,0,0,0,0,59.8307324792375,55.2250065728601,54.5476365599633,1.87467667973554,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,24.6105974801742,33.7334303172851,0,0,0,0,0,0,0,0.788123040807709,0,2.56686072559497,0,0,0,0.335032530668698,0,99.6179341849753,134.622656641811,157.063479592257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9211380114623,22.2185626843175,18.1436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74953878978203,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0.826424576804891,0.768760269460425,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.478587984798,0,0,0,0,0,0.211107635297664,0,0,0,0.865999014529609,1.34060455107157,1.08890984861323,2.91845782408015,0,0,0.443430153536676,0,46.1777324401274,55.8185161213934,64.9397793378545,42.4052560314864,50.5975595896019,61.6049645633081,44.8226092907635,57.1050126931875,0,0,0.490080431962063,0.557409525377156,0,0,0,0.997896857164083,8.42623628582414,0,6.81706074576566,8.98550969963068,6.16233633389619,0,0,0.169291777801603,1.76646882614069,4.43959355820305,3.40676990152261,5.49608551609224,1.53620382154229,4.2498460499559,3.33698283423817,4.88470238505101,0,0,0,0,0,0,3.66270448179735,0,4.90350890820905,0,0.23874448473769,0.890894042497916,0,0,0.984685914873589,0,0,0,1.79323189425963,0.828851746593443,0,0,10.4622084641909,0,0.179736702294654,0,0.511572370226872,0.887790650732402,50.2914493928574,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,2.65722415744152,0.60298219312704,0,0.331737779793674,0,0,0.10893846351899,0,0.538651809526579,0,0,0,0,1.27600463892768,0.366390373607449,1.5991043280559,0,0.784901281975124,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0.296521128680622,0.86494757262552,0.939797545549098,0.741412462787447,3.21031058919516,0.937057782901357,0,0.391329237864179,0,0,1.20990716048664,0.30607276163049,4.61262031287962,0,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0.391969589657511,0.0870592065804026,1.39781334593624,0,0,0.0730893170861856,0,0.387956065953678,0,0.677942222341597,0,0.19871461170299,0.443175571691151,0,0.0801588202515337,0.85381197895741,0,0.144090417154106,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,1.77976992559591,0,0,3.6804229599104,1.11712960508902,1.14580212005842,0,1.19807400299395,1.28767814440971,1.33902874465124,0.739018197353989,0,0,0,0,0,0,1.43944664511834,0,0.681017030557878,0,0,0,6.29926896344201,5.41661368190565,0.303747783290123,0,0.472834243795189,0.472091293214983,0.105600336519406,0,0,4.2881719582402,3.31045985182716,0,0,0,0,0,0,0,0.113312091520126,1.02586563574658,0,0.387848869084652,1.05786081394152,0,0,9.93122936879561,1.7292473560963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| ||
|short_description=p2@NCF2 | |short_description=p2@NCF2 | ||
}} | }} |
Latest revision as of 03:36, 19 September 2015
Short description: | p2@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 78bp_to_ENST00000367535_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.92e-68 | 98 |
blood island | 9.92e-68 | 98 |
hemolymphoid system | 2.66e-62 | 108 |
bone marrow | 1.30e-55 | 76 |
immune system | 5.91e-51 | 93 |
bone element | 6.76e-50 | 82 |
skeletal element | 5.24e-45 | 90 |
skeletal system | 2.88e-38 | 100 |
lateral plate mesoderm | 5.40e-26 | 203 |
musculoskeletal system | 5.00e-16 | 167 |
connective tissue | 2.56e-12 | 371 |
blood | 2.41e-11 | 15 |
haemolymphatic fluid | 2.41e-11 | 15 |
organism substance | 2.41e-11 | 15 |
mesoderm | 1.02e-09 | 315 |
mesoderm-derived structure | 1.02e-09 | 315 |
presumptive mesoderm | 1.02e-09 | 315 |