FFCP PHASE1:Hg19::chr1:183133608..183133625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183133608..183133625,- | |||
|coexpression_cluster_id=C1021 | |coexpression_cluster_id=C1021 | ||
|description=CAGE_peak_at_chr1:183133608..183133625,- | |description=CAGE_peak_at_chr1:183133608..183133625,- | ||
|id=chr1:183133608..183133625,- | |id=chr1:183133608..183133625,- | ||
|ontology_enrichment_celltype=CL:0000066!2.17e-27!254;CL:0002076!3.54e-18!43;CL:0002368!5.78e-14!13;CL:0002159!3.58e-13!13;CL:0000223!5.50e-13!59;CL:0000076!4.44e-10!62;CL:0002202!1.08e-09!9;CL:0002632!1.08e-09!9;CL:0000220!1.77e-08!246;CL:0000068!2.00e-08!3;CL:0000069!2.00e-08!3;CL:0000307!2.00e-08!3;CL:0000377!2.00e-08!3;CL:0000063!2.13e-08!578;CL:0002321!2.56e-08!248;CL:0002328!2.59e-08!3;CL:0002166!2.59e-08!3;CL:0002621!3.19e-08!3;CL:0002251!4.68e-07!21;CL:0000362!5.07e-07!8;CL:0000548!7.67e-07!679;CL:0000004!7.67e-07!679;CL:0000255!7.67e-07!679 | |ontology_enrichment_celltype=CL:0000066!2.17e-27!254;CL:0002076!3.54e-18!43;CL:0002368!5.78e-14!13;CL:0002159!3.58e-13!13;CL:0000223!5.50e-13!59;CL:0000076!4.44e-10!62;CL:0002202!1.08e-09!9;CL:0002632!1.08e-09!9;CL:0000220!1.77e-08!246;CL:0000068!2.00e-08!3;CL:0000069!2.00e-08!3;CL:0000307!2.00e-08!3;CL:0000377!2.00e-08!3;CL:0000063!2.13e-08!578;CL:0002321!2.56e-08!248;CL:0002328!2.59e-08!3;CL:0002166!2.59e-08!3;CL:0002621!3.19e-08!3;CL:0002251!4.68e-07!21;CL:0000362!5.07e-07!8;CL:0000548!7.67e-07!679;CL:0000004!7.67e-07!679;CL:0000255!7.67e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002202;2.45e-44;9!CL:0002632;2.45e-44;9!CL:0002368;1.42e-41;13!CL:0000307;2.59e-34;3!CL:0002328;4.56e-34;3!CL:0002166;7.14e-34;3!CL:0002621;2.73e-33;3!CL:0000244;3.13e-25;4!CL:0000731;3.13e-25;4!CL:0002076;9.10e-24;42!CL:0002159;5.97e-13;14!CL:0002252;3.64e-12;1!CL:0002251;5.66e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.64e-44,9;CL:0002632,2.64e-44,9;CL:0002368,1.46e-41,13;CL:0000068,1.96e-34,3;CL:0000069,1.96e-34,3;CL:0000307,1.96e-34,3;CL:0000377,1.96e-34,3;CL:0002328,6.76e-34,3;CL:0002166,6.76e-34,3;CL:0002621,1.85e-33,3;CL:0002076,1.92e-30,42;CL:0000244,4.19e-25,4;CL:0000731,4.19e-25,4;CL:0000223,1.18e-21,58;CL:0002159,5.78e-13,14;CL:0002252,3.85e-12,1;CL:0000066,5.57e-12,253;CL:0002251,5.31e-09,20;CL:0002321,8.06e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000377;2.59e-34;3!CL:0000223;1.38e-12;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!2.01e-09!6;UBERON:0005631!7.51e-09!14;UBERON:0000158!7.51e-09!14;UBERON:0004815!2.59e-08!3;UBERON:0002031!2.59e-08!3;UBERON:0001949!3.19e-08!3;UBERON:0000365!1.30e-07!5 | |ontology_enrichment_uberon=UBERON:0005910!2.01e-09!6;UBERON:0005631!7.51e-09!14;UBERON:0000158!7.51e-09!14;UBERON:0004815!2.59e-08!3;UBERON:0002031!2.59e-08!3;UBERON:0001949!3.19e-08!3;UBERON:0000365!1.30e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.56e-34;3!UBERON:0002031;4.56e-34;3!UBERON:0001949;2.73e-33;3!UBERON:0000486;2.29e-32;12!UBERON:0007196;1.59e-26;15!UBERON:0001558;1.59e-26;15!UBERON:0001708;1.36e-25;4!UBERON:0008895;1.36e-25;4!UBERON:0002185;9.87e-21;5!UBERON:0011159;1.29e-20;5!UBERON:0000365;2.51e-20;5!UBERON:0005911;1.00e-18;36!UBERON:0004807;1.01e-17;22!UBERON:0005910;4.75e-17;6!UBERON:0005178;2.19e-15;34!UBERON:0002224;2.19e-15;34!UBERON:0003126;4.27e-15;7!UBERON:0001005;4.27e-15;7!UBERON:0000485;5.41e-15;7!UBERON:0003929;1.15e-14;7!UBERON:0005181;5.33e-14;35!UBERON:0003350;6.60e-13;8!UBERON:0001828;6.60e-13;8!UBERON:0000072;4.81e-10;37!UBERON:0000065;8.09e-10;44!UBERON:0011137;1.08e-09;11!UBERON:0010323;1.08e-09;11!UBERON:0003729;3.75e-08;13!UBERON:0001004;6.83e-07;65!UBERON:0000075;8.08e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.76e-34,3;UBERON:0002031,6.76e-34,3;UBERON:0001949,1.85e-33,3;UBERON:0007196,1.67e-26,15;UBERON:0001558,1.67e-26,15;UBERON:0001708,1.30e-25,4;UBERON:0008895,1.30e-25,4;UBERON:0011159,1.25e-20,5;UBERON:0002185,1.25e-20,5;UBERON:0000365,3.17e-20,5;UBERON:0010188,2.66e-17,6;UBERON:0002539,2.66e-17,6;UBERON:0008816,2.66e-17,6;UBERON:0005910,5.76e-17,6;UBERON:0005178,1.97e-15,34;UBERON:0002224,1.97e-15,34;UBERON:0003126,3.79e-15,7;UBERON:0001005,3.79e-15,7;UBERON:0005181,5.66e-15,35;UBERON:0004807,7.40e-14,28;UBERON:0001004,9.62e-14,74;UBERON:0003350,5.71e-13,8;UBERON:0001828,5.71e-13,8;UBERON:0000485,9.79e-12,9;UBERON:0004119,1.64e-11,160;UBERON:0000925,1.64e-11,160;UBERON:0006595,1.64e-11,160;UBERON:0008947,2.92e-10,38;UBERON:0003258,2.92e-10,38;UBERON:0000915,7.18e-10,52;UBERON:0005911,9.47e-10,82;UBERON:0010323,1.06e-09,11;UBERON:0000065,1.48e-09,54;UBERON:0000072,3.22e-08,47;UBERON:0003729,3.44e-08,13;UBERON:0011137,9.90e-08,14;UBERON:0000075,8.00e-07,16;UBERON:0000033,9.84e-07,56 | |||
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| ||
|short_description=p@chr1:183133608..183133625,- | |short_description=p@chr1:183133608..183133625,- | ||
}} | }} |
Latest revision as of 01:08, 28 July 2015
Short description: | p@chr1:183133608..183133625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183133608..183133625, - |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.64e-44 | 9 |
epithelial cell of lower respiratory tract | 2.64e-44 | 9 |
respiratory epithelial cell | 1.46e-41 | 13 |
duct epithelial cell | 1.96e-34 | 3 |
branched duct epithelial cell | 1.96e-34 | 3 |
tracheal epithelial cell | 1.96e-34 | 3 |
tracheoblast | 1.96e-34 | 3 |
bronchial epithelial cell | 6.76e-34 | 3 |
epithelial cell of Malassez | 6.76e-34 | 3 |
gingival epithelial cell | 1.85e-33 | 3 |
endo-epithelial cell | 1.92e-30 | 42 |
transitional epithelial cell | 4.19e-25 | 4 |
urothelial cell | 4.19e-25 | 4 |
endodermal cell | 1.18e-21 | 58 |
general ecto-epithelial cell | 5.78e-13 | 14 |
epithelial cell of esophagus | 3.85e-12 | 1 |
epithelial cell | 5.57e-12 | 253 |
epithelial cell of alimentary canal | 5.31e-09 | 20 |
embryonic cell | 8.06e-08 | 250 |