FFCP PHASE1:Hg19::chr1:156721849..156721873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt=P51858 | |UniProt=P51858 | ||
|association_with_transcript=-306bp_to_NM_004494,uc001fpy.3,uc009wsg.2_5end | |association_with_transcript=-306bp_to_NM_004494,uc001fpy.3,uc009wsg.2_5end | ||
|cluster_id=chr1:156721849..156721873,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_13_at_HDGF_5end | |description=CAGE_peak_13_at_HDGF_5end | ||
|id=chr1:156721849..156721873,- | |id=chr1:156721849..156721873,- | ||
|ontology_enrichment_celltype=CL:0000055!6.03e-12!180;CL:0000220!3.15e-09!246;CL:0002321!7.65e-09!248;CL:0000680!1.01e-07!57;CL:0000056!1.01e-07!57;CL:0000355!1.01e-07!57;CL:0000057!2.06e-07!75;CL:0000222!3.14e-07!119;CL:0000187!8.72e-07!54 | |ontology_enrichment_celltype=CL:0000055!6.03e-12!180;CL:0000220!3.15e-09!246;CL:0002321!7.65e-09!248;CL:0000680!1.01e-07!57;CL:0000056!1.01e-07!57;CL:0000355!1.01e-07!57;CL:0000057!2.06e-07!75;CL:0000222!3.14e-07!119;CL:0000187!8.72e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002615;3.25e-10;3!CL:0002554;1.70e-07;2!CL:0002594;1.82e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.25e-10,3;CL:0002554,8.12e-08,2;CL:0002594,3.77e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.36e-12!216;UBERON:0003104!1.59e-10!238;UBERON:0009142!1.59e-10!238;UBERON:0000475!8.58e-10!365;UBERON:0005256!2.29e-09!143;UBERON:0000490!2.66e-09!138;UBERON:0004290!2.66e-07!70;UBERON:0000481!2.89e-07!347;UBERON:0000119!5.73e-07!312;UBERON:0001134!6.28e-07!61;UBERON:0002036!6.28e-07!61;UBERON:0003082!6.28e-07!61;UBERON:0000468!7.14e-07!659;UBERON:0009569!7.23e-07!113 | |ontology_enrichment_uberon=UBERON:0002100!2.36e-12!216;UBERON:0003104!1.59e-10!238;UBERON:0009142!1.59e-10!238;UBERON:0000475!8.58e-10!365;UBERON:0005256!2.29e-09!143;UBERON:0000490!2.66e-09!138;UBERON:0004290!2.66e-07!70;UBERON:0000481!2.89e-07!347;UBERON:0000119!5.73e-07!312;UBERON:0001134!6.28e-07!61;UBERON:0002036!6.28e-07!61;UBERON:0003082!6.28e-07!61;UBERON:0000468!7.14e-07!659;UBERON:0009569!7.23e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.73e-13;6!UBERON:0002358;2.73e-13;6!UBERON:0003684;2.73e-13;6!UBERON:0001178;2.73e-13;6!UBERON:0004457;9.68e-09;9!UBERON:0000042;9.68e-09;9!UBERON:0001310;1.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.88e-13,6;UBERON:0002358,1.88e-13,6;UBERON:0003684,1.88e-13,6;UBERON:0001178,1.88e-13,6;UBERON:0002100,8.64e-08,199;UBERON:0009569,1.25e-07,112;UBERON:0002417,1.49e-07,60;UBERON:0000916,1.49e-07,60;UBERON:0001310,3.77e-07,4 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.40954404095971,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0,0.737201809504527,2.09340350391728,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0.61560529038394,1.22400414746552,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,0,0.506522046658319,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0.117434498643765,0.647491777472526,0.421352420106746,0.408308342509787,0,0.103325781175765,0,0.247266929278557,1.82032272387605,2.87447256726495,0,0,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,0,0.487185025805993,0.757301322732344,0.552299391853796,0.646584227275248,0.710019185033229,0.604512589365842,0.339121184620975,0.57978255948989,0,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0.928735856063958,0.721879481669586,1.65629520055781,0.674338760312407,0.723033089650446,0.882351781859152,1.52515610864684,1.42362371466658,1.34831308160164,0.98110732562673,0.38474715694639,0,0,0.8231480226628,0,15.2106041786197,15.725235466842,7.68026878685825,0,0.368965315629341,0.343135620597051,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0,1.58040879591855,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0.766765358330422,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0.600686115687835,0,0.336393253036082,0.43596006883328,0.2933531432838,0.387815147273333,0,0,0.26593811658487,1.04007436911366,1.02882949704857,0,0,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.599837947092342,0,0,0,0.718874566474748,0,1.42636905040718,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,1.03985430765404,0.892144943985809,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.434418072340414,0,1.02943027143257,0,0,0,0.303127571446259,0,0,0.992431231275107,0.153461973288062,0.280660094433074,0.896974044789907,2.55853624533352,1.28683136914886,2.96836132889982,0.616838775210622,0.710246901252508,0.492762936082855,0.519254429183621,0.464841513839837,0,0.40101294060657,0.368323955743585,0.803701137152247,0.728364672026868,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0,1.13733384070897,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0.261435451024901,0.256450125116389,0,0,3.60643540767028,0,0.082509499920588,0,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0.426133137080504,0.445160178233687,0,0.192190067365106,0,0.2023155617111,1.85938219718914,1.25924938732256,2.0911118104818,0,0,0,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0.762520775695299,1.79128453917934,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.824686816419805,0.808729926293264,0,0.421258456238981,0.975267478179181,0,0,0.9554993798559,0.707027159768564,0,0.551365343546124,0,1.31535265576129,2.89387767133344,0,1.01455188481352,1.239293992399,1.12678241012897,0,0.392996164052485,0.35667105148125,0.709522128141196,0,0.329294892959902,0.75894634753143,0.349934720244983,0.577332676353072,0.670302275535787,1.08890984861323,4.0481834334015,0.86101074534246,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.568272293612826,0,0,0.307160702099232,0,0.281338832821026,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,1.3480252672099,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,1.74919999992391,2.89999830173917,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794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|phase1_expression=0.54503513781167,0.642301571672949,1.40954404095971,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0,0.737201809504527,2.09340350391728,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0,0,0,0.61560529038394,1.22400414746552,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0.872188104285069,0,0.506522046658319,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.747243402759005,0.117434498643765,0.647491777472526,0.421352420106746,0.408308342509787,0,0.103325781175765,0,0.247266929278557,1.82032272387605,2.87447256726495,0,0,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.103052529238439,1.03056216018252,0.37223371266318,0,0.487185025805993,0.757301322732344,0.552299391853796,0.646584227275248,0.710019185033229,0.604512589365842,0.339121184620975,0.57978255948989,0,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0.928735856063958,0.721879481669586,1.65629520055781,0.674338760312407,0.723033089650446,0.882351781859152,1.52515610864684,1.42362371466658,1.34831308160164,0.98110732562673,0.38474715694639,0,0,0.8231480226628,0,15.2106041786197,15.725235466842,7.68026878685825,0,0.368965315629341,0.343135620597051,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0,1.58040879591855,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0.766765358330422,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0.102827492703324,0.600686115687835,0,0.336393253036082,0.43596006883328,0.2933531432838,0.387815147273333,0,0,0.26593811658487,1.04007436911366,1.02882949704857,0,0,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.599837947092342,0,0,0,0.718874566474748,0,1.42636905040718,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,1.03985430765404,0.892144943985809,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.434418072340414,0,1.02943027143257,0,0,0,0.303127571446259,0,0,0.992431231275107,0.153461973288062,0.280660094433074,0.896974044789907,2.55853624533352,1.28683136914886,2.96836132889982,0.616838775210622,0.710246901252508,0.492762936082855,0.519254429183621,0.464841513839837,0,0.40101294060657,0.368323955743585,0.803701137152247,0.728364672026868,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0,1.13733384070897,0,0,0,0.541892875087706,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0.261435451024901,0.256450125116389,0,0,3.60643540767028,0,0.082509499920588,0,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0.551346289938122,0.214840489736547,0.145016693914229,0.426133137080504,0.445160178233687,0,0.192190067365106,0,0.2023155617111,1.85938219718914,1.25924938732256,2.0911118104818,0,0,0,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0.762520775695299,1.79128453917934,0,0,0.78494864019923,0.359744915166629,0.274537029736055,0.824686816419805,0.808729926293264,0,0.421258456238981,0.975267478179181,0,0,0.9554993798559,0.707027159768564,0,0.551365343546124,0,1.31535265576129,2.89387767133344,0,1.01455188481352,1.239293992399,1.12678241012897,0,0.392996164052485,0.35667105148125,0.709522128141196,0,0.329294892959902,0.75894634753143,0.349934720244983,0.577332676353072,0.670302275535787,1.08890984861323,4.0481834334015,0.86101074534246,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.568272293612826,0,0,0.307160702099232,0,0.281338832821026,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,1.3480252672099,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,1.74919999992391,2.89999830173917,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794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| ||
|short_description=p13@HDGF | |short_description=p13@HDGF | ||
}} | }} |
Latest revision as of 17:56, 17 September 2015
Short description: | p13@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HDGF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -306bp_to_NM_004494, uc001fpy.3, uc009wsg.2_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | P51858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.25e-10 | 3 |
fibroblast of lymphatic vessel | 8.12e-08 | 2 |
smooth muscle cell of the umbilical artery | 3.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.88e-13 | 6 |
peritoneum | 1.88e-13 | 6 |
abdominal cavity | 1.88e-13 | 6 |
visceral peritoneum | 1.88e-13 | 6 |
trunk | 8.64e-08 | 199 |
subdivision of trunk | 1.25e-07 | 112 |
abdominal segment of trunk | 1.49e-07 | 60 |
abdomen | 1.49e-07 | 60 |
umbilical artery | 3.77e-07 | 4 |