FFCP PHASE1:Hg19::chr1:155829286..155829340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23208 | |EntrezGene=23208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19239 | |HGNC=19239 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT88 | |UniProt=Q9BT88 | ||
|association_with_transcript=0bp_to_ENST00000368324,uc001fmg.2,uc010pgq.1_5end | |association_with_transcript=0bp_to_ENST00000368324,uc001fmg.2,uc010pgq.1_5end | ||
|cluster_id=chr1:155829286..155829340,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_SYT11_5end | |description=CAGE_peak_2_at_SYT11_5end | ||
|id=chr1:155829286..155829340,+ | |id=chr1:155829286..155829340,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.85e-20!180;CL:0000057!1.45e-07!75;CL:0000192!7.23e-07!42;CL:0000514!7.23e-07!42;CL:0000183!7.80e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.85e-20!180;CL:0000057!1.45e-07!75;CL:0000192!7.23e-07!42;CL:0000514!7.23e-07!42;CL:0000183!7.80e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.15e-07,76;CL:0000192,5.21e-07,43;CL:0000514,5.21e-07,43;CL:0000393,9.96e-07,61;CL:0000211,9.96e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.73e-37!94;UBERON:0001016!2.73e-37!94;UBERON:0005743!6.62e-36!86;UBERON:0001017!6.56e-35!82;UBERON:0001049!6.68e-34!57;UBERON:0005068!6.68e-34!57;UBERON:0006241!6.68e-34!57;UBERON:0007135!6.68e-34!57;UBERON:0000955!1.56e-31!69;UBERON:0006238!1.56e-31!69;UBERON:0003075!1.52e-30!86;UBERON:0007284!1.52e-30!86;UBERON:0002616!2.13e-30!59;UBERON:0002346!4.46e-30!90;UBERON:0003080!1.09e-25!42;UBERON:0002780!1.15e-25!41;UBERON:0001890!1.15e-25!41;UBERON:0006240!1.15e-25!41;UBERON:0003056!9.44e-23!61;UBERON:0001893!1.27e-21!34;UBERON:0002020!1.41e-21!34;UBERON:0003528!1.41e-21!34;UBERON:0002791!5.77e-21!33;UBERON:0001869!2.01e-20!32;UBERON:0000025!4.33e-20!194;UBERON:0000033!6.21e-20!123;UBERON:0007023!4.55e-19!115;UBERON:0000153!7.60e-19!129;UBERON:0007811!7.60e-19!129;UBERON:0000924!1.15e-18!173;UBERON:0006601!1.15e-18!173;UBERON:0004121!1.43e-18!169;UBERON:0000956!5.08e-16!25;UBERON:0000203!5.08e-16!25;UBERON:0004111!7.28e-15!241;UBERON:0002619!1.53e-14!22;UBERON:0000477!2.34e-13!286;UBERON:0001950!2.65e-13!20;UBERON:0000119!6.00e-12!312;UBERON:0000483!1.00e-11!309;UBERON:0002049!3.37e-11!79;UBERON:0007798!3.37e-11!79;UBERON:0000055!1.02e-10!69;UBERON:0000475!1.16e-10!365;UBERON:0001981!2.31e-10!60;UBERON:0007500!2.31e-10!60;UBERON:0004537!2.31e-10!60;UBERON:0006965!2.31e-10!60;UBERON:0001009!8.67e-10!113;UBERON:0004535!1.68e-09!110;UBERON:0003076!2.96e-09!15;UBERON:0003057!2.96e-09!15;UBERON:0001637!4.35e-09!42;UBERON:0003509!4.35e-09!42;UBERON:0004572!4.35e-09!42;UBERON:0004573!4.23e-08!33;UBERON:0004571!4.23e-08!33;UBERON:0000468!5.48e-08!659;UBERON:0004732!5.49e-08!13;UBERON:0004872!5.98e-08!84;UBERON:0004733!2.08e-07!12;UBERON:0002028!2.08e-07!12;UBERON:0007277!2.08e-07!12;UBERON:0000480!4.38e-07!626;UBERON:0002420!4.51e-07!9;UBERON:0007245!4.51e-07!9;UBERON:0010009!4.51e-07!9;UBERON:0010011!4.51e-07!9;UBERON:0000454!4.51e-07!9;UBERON:0000914!4.75e-07!83;UBERON:0002329!4.75e-07!83;UBERON:0003077!4.75e-07!83;UBERON:0003059!4.75e-07!83;UBERON:0007282!4.75e-07!83;UBERON:0009618!4.75e-07!83;UBERON:0007285!4.75e-07!83;UBERON:0002308!5.12e-07!9;UBERON:0000125!5.12e-07!9;UBERON:0000467!5.44e-07!625 | |ontology_enrichment_uberon=UBERON:0000073!2.73e-37!94;UBERON:0001016!2.73e-37!94;UBERON:0005743!6.62e-36!86;UBERON:0001017!6.56e-35!82;UBERON:0001049!6.68e-34!57;UBERON:0005068!6.68e-34!57;UBERON:0006241!6.68e-34!57;UBERON:0007135!6.68e-34!57;UBERON:0000955!1.56e-31!69;UBERON:0006238!1.56e-31!69;UBERON:0003075!1.52e-30!86;UBERON:0007284!1.52e-30!86;UBERON:0002616!2.13e-30!59;UBERON:0002346!4.46e-30!90;UBERON:0003080!1.09e-25!42;UBERON:0002780!1.15e-25!41;UBERON:0001890!1.15e-25!41;UBERON:0006240!1.15e-25!41;UBERON:0003056!9.44e-23!61;UBERON:0001893!1.27e-21!34;UBERON:0002020!1.41e-21!34;UBERON:0003528!1.41e-21!34;UBERON:0002791!5.77e-21!33;UBERON:0001869!2.01e-20!32;UBERON:0000025!4.33e-20!194;UBERON:0000033!6.21e-20!123;UBERON:0007023!4.55e-19!115;UBERON:0000153!7.60e-19!129;UBERON:0007811!7.60e-19!129;UBERON:0000924!1.15e-18!173;UBERON:0006601!1.15e-18!173;UBERON:0004121!1.43e-18!169;UBERON:0000956!5.08e-16!25;UBERON:0000203!5.08e-16!25;UBERON:0004111!7.28e-15!241;UBERON:0002619!1.53e-14!22;UBERON:0000477!2.34e-13!286;UBERON:0001950!2.65e-13!20;UBERON:0000119!6.00e-12!312;UBERON:0000483!1.00e-11!309;UBERON:0002049!3.37e-11!79;UBERON:0007798!3.37e-11!79;UBERON:0000055!1.02e-10!69;UBERON:0000475!1.16e-10!365;UBERON:0001981!2.31e-10!60;UBERON:0007500!2.31e-10!60;UBERON:0004537!2.31e-10!60;UBERON:0006965!2.31e-10!60;UBERON:0001009!8.67e-10!113;UBERON:0004535!1.68e-09!110;UBERON:0003076!2.96e-09!15;UBERON:0003057!2.96e-09!15;UBERON:0001637!4.35e-09!42;UBERON:0003509!4.35e-09!42;UBERON:0004572!4.35e-09!42;UBERON:0004573!4.23e-08!33;UBERON:0004571!4.23e-08!33;UBERON:0000468!5.48e-08!659;UBERON:0004732!5.49e-08!13;UBERON:0004872!5.98e-08!84;UBERON:0004733!2.08e-07!12;UBERON:0002028!2.08e-07!12;UBERON:0007277!2.08e-07!12;UBERON:0000480!4.38e-07!626;UBERON:0002420!4.51e-07!9;UBERON:0007245!4.51e-07!9;UBERON:0010009!4.51e-07!9;UBERON:0010011!4.51e-07!9;UBERON:0000454!4.51e-07!9;UBERON:0000914!4.75e-07!83;UBERON:0002329!4.75e-07!83;UBERON:0003077!4.75e-07!83;UBERON:0003059!4.75e-07!83;UBERON:0007282!4.75e-07!83;UBERON:0009618!4.75e-07!83;UBERON:0007285!4.75e-07!83;UBERON:0002308!5.12e-07!9;UBERON:0000125!5.12e-07!9;UBERON:0000467!5.44e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.16e-19;34!UBERON:0003528;1.05e-18;34!UBERON:0002020;1.05e-18;34!UBERON:0001869;1.21e-18;32!UBERON:0000073;1.40e-18;53!UBERON:0002616;1.40e-18;53!UBERON:0002791;1.41e-18;32!UBERON:0002780;1.46e-18;41!UBERON:0001890;1.46e-18;41!UBERON:0000956;4.37e-16;25!UBERON:0000203;4.37e-16;25!UBERON:0002619;1.33e-14;22!UBERON:0001017;1.73e-14;75!UBERON:0000955;2.65e-14;68!UBERON:0001950;2.33e-13;20!UBERON:0001016;2.90e-13;83!UBERON:0004732;5.09e-08;13!UBERON:0004573;1.35e-07;33!UBERON:0004571;1.35e-07;33!UBERON:0004733;1.95e-07;12!UBERON:0002028;1.95e-07;12!UBERON:0001637;2.79e-07;42!UBERON:0003509;2.79e-07;42!UBERON:0004572;2.79e-07;42!UBERON:0002420;4.22e-07;9!UBERON:0007245;4.22e-07;9!UBERON:0010009;4.22e-07;9!UBERON:0010011;4.22e-07;9!UBERON:0000454;4.22e-07;9!UBERON:0000125;4.81e-07;9!UBERON:0002308;4.81e-07;9 | |||
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| ||
|short_description=p2@SYT11 | |short_description=p2@SYT11 | ||
}} | }} |
Latest revision as of 13:21, 17 September 2015
Short description: | p2@SYT11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT11_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000368324, uc001fmg.2, uc010pgq.1_5end |
EntrezGene: | SYT11 |
HGNC: | 19239 |
UniProt: | Q9BT88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.15e-07 | 76 |
smooth muscle cell | 5.21e-07 | 43 |
smooth muscle myoblast | 5.21e-07 | 43 |
electrically responsive cell | 9.96e-07 | 61 |
electrically active cell | 9.96e-07 | 61 |