FFCP PHASE1:Hg19::chr1:12678204..12678238,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=-384bp_to_NM_004753,uc001auc.2,uc001aud.3,uc009vnm.2_5end | |association_with_transcript=-384bp_to_NM_004753,uc001auc.2,uc001aud.3,uc009vnm.2_5end | ||
|cluster_id=chr1:12678204..12678238,- | |||
|coexpression_cluster_id=C928 | |coexpression_cluster_id=C928 | ||
|description=CAGE_peak_1_at_DHRS3_5end | |description=CAGE_peak_1_at_DHRS3_5end | ||
|id=chr1:12678204..12678238,- | |id=chr1:12678204..12678238,- | ||
|ontology_enrichment_celltype=CL:0000222!7.10e-20!119;CL:0000183!1.54e-15!59;CL:0000187!2.87e-15!54;CL:0000192!9.12e-15!42;CL:0000514!9.12e-15!42;CL:0000680!4.46e-14!57;CL:0000056!4.46e-14!57;CL:0000355!4.46e-14!57;CL:0000359!1.40e-13!32;CL:0000393!1.98e-12!60;CL:0000211!1.98e-12!60;CL:0002321!2.97e-11!248;CL:0000220!3.86e-11!246;CL:0000055!1.05e-08!180;CL:0000136!3.63e-07!15;CL:0000213!8.24e-07!57;CL:0000215!8.24e-07!57 | |ontology_enrichment_celltype=CL:0000222!7.10e-20!119;CL:0000183!1.54e-15!59;CL:0000187!2.87e-15!54;CL:0000192!9.12e-15!42;CL:0000514!9.12e-15!42;CL:0000680!4.46e-14!57;CL:0000056!4.46e-14!57;CL:0000355!4.46e-14!57;CL:0000359!1.40e-13!32;CL:0000393!1.98e-12!60;CL:0000211!1.98e-12!60;CL:0002321!2.97e-11!248;CL:0000220!3.86e-11!246;CL:0000055!1.05e-08!180;CL:0000136!3.63e-07!15;CL:0000213!8.24e-07!57;CL:0000215!8.24e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.32e-13;32!CL:0000192;5.67e-11;43!CL:0000187;2.25e-08;55!CL:0000393;1.77e-07;61!CL:0000211;1.77e-07;61!CL:0000136;6.50e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.07e-20,121;CL:0000187,1.84e-15,55;CL:0000192,9.65e-15,43;CL:0000514,9.65e-15,43;CL:0000680,4.71e-14,58;CL:0000056,4.71e-14,58;CL:0000355,4.71e-14,58;CL:0000359,5.81e-14,32;CL:0000393,7.98e-13,61;CL:0000211,7.98e-13,61;CL:0002321,2.08e-11,250;CL:0000136,2.40e-07,15;CL:0000213,5.65e-07,58;CL:0000215,5.65e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;5.67e-11;43!CL:0000355;2.15e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.97e-23!241;UBERON:0003914!2.77e-23!118;UBERON:0000483!1.15e-21!309;UBERON:0000119!1.61e-21!312;UBERON:0000477!5.63e-21!286;UBERON:0000490!9.43e-21!138;UBERON:0000481!1.65e-19!347;UBERON:0000025!3.30e-19!194;UBERON:0000475!7.22e-19!365;UBERON:0002100!1.16e-18!216;UBERON:0005256!5.63e-18!143;UBERON:0002049!1.02e-15!79;UBERON:0007798!1.02e-15!79;UBERON:0001981!6.50e-15!60;UBERON:0007500!6.50e-15!60;UBERON:0004537!6.50e-15!60;UBERON:0006965!6.50e-15!60;UBERON:0002385!7.80e-15!63;UBERON:0001015!7.80e-15!63;UBERON:0000383!7.80e-15!63;UBERON:0001134!8.67e-15!61;UBERON:0002036!8.67e-15!61;UBERON:0003082!8.67e-15!61;UBERON:0003104!3.64e-14!238;UBERON:0009142!3.64e-14!238;UBERON:0000055!4.07e-14!69;UBERON:0001637!8.47e-14!42;UBERON:0003509!8.47e-14!42;UBERON:0004572!8.47e-14!42;UBERON:0004872!1.68e-13!84;UBERON:0000468!2.75e-12!659;UBERON:0004573!1.08e-11!33;UBERON:0004571!1.08e-11!33;UBERON:0001009!6.89e-11!113;UBERON:0004535!9.15e-11!110;UBERON:0004290!1.00e-10!70;UBERON:0003064!3.20e-10!37;UBERON:0000486!3.20e-09!82;UBERON:0000467!4.41e-09!625;UBERON:0000466!7.44e-09!126;UBERON:0000480!7.86e-09!626;UBERON:0003103!9.42e-09!69;UBERON:0009569!3.22e-08!113;UBERON:0003886!7.25e-08!63;UBERON:0000922!8.28e-08!612;UBERON:0000914!1.06e-07!83;UBERON:0002329!1.06e-07!83;UBERON:0003077!1.06e-07!83;UBERON:0003059!1.06e-07!83;UBERON:0007282!1.06e-07!83;UBERON:0009618!1.06e-07!83;UBERON:0007285!1.06e-07!83;UBERON:0007625!1.56e-07!11;UBERON:0002050!3.00e-07!605;UBERON:0005423!3.00e-07!605;UBERON:0005177!3.69e-07!107;UBERON:0000923!4.72e-07!604;UBERON:0005291!4.72e-07!604;UBERON:0006598!4.72e-07!604;UBERON:0002532!4.72e-07!604;UBERON:0002417!4.96e-07!61;UBERON:0000916!4.96e-07!61;UBERON:0000058!5.20e-07!26;UBERON:0002553!5.88e-07!70;UBERON:0001008!9.38e-07!45;UBERON:0000464!9.46e-07!104;UBERON:0004876!9.57e-07!20 | |ontology_enrichment_uberon=UBERON:0004111!1.97e-23!241;UBERON:0003914!2.77e-23!118;UBERON:0000483!1.15e-21!309;UBERON:0000119!1.61e-21!312;UBERON:0000477!5.63e-21!286;UBERON:0000490!9.43e-21!138;UBERON:0000481!1.65e-19!347;UBERON:0000025!3.30e-19!194;UBERON:0000475!7.22e-19!365;UBERON:0002100!1.16e-18!216;UBERON:0005256!5.63e-18!143;UBERON:0002049!1.02e-15!79;UBERON:0007798!1.02e-15!79;UBERON:0001981!6.50e-15!60;UBERON:0007500!6.50e-15!60;UBERON:0004537!6.50e-15!60;UBERON:0006965!6.50e-15!60;UBERON:0002385!7.80e-15!63;UBERON:0001015!7.80e-15!63;UBERON:0000383!7.80e-15!63;UBERON:0001134!8.67e-15!61;UBERON:0002036!8.67e-15!61;UBERON:0003082!8.67e-15!61;UBERON:0003104!3.64e-14!238;UBERON:0009142!3.64e-14!238;UBERON:0000055!4.07e-14!69;UBERON:0001637!8.47e-14!42;UBERON:0003509!8.47e-14!42;UBERON:0004572!8.47e-14!42;UBERON:0004872!1.68e-13!84;UBERON:0000468!2.75e-12!659;UBERON:0004573!1.08e-11!33;UBERON:0004571!1.08e-11!33;UBERON:0001009!6.89e-11!113;UBERON:0004535!9.15e-11!110;UBERON:0004290!1.00e-10!70;UBERON:0003064!3.20e-10!37;UBERON:0000486!3.20e-09!82;UBERON:0000467!4.41e-09!625;UBERON:0000466!7.44e-09!126;UBERON:0000480!7.86e-09!626;UBERON:0003103!9.42e-09!69;UBERON:0009569!3.22e-08!113;UBERON:0003886!7.25e-08!63;UBERON:0000922!8.28e-08!612;UBERON:0000914!1.06e-07!83;UBERON:0002329!1.06e-07!83;UBERON:0003077!1.06e-07!83;UBERON:0003059!1.06e-07!83;UBERON:0007282!1.06e-07!83;UBERON:0009618!1.06e-07!83;UBERON:0007285!1.06e-07!83;UBERON:0007625!1.56e-07!11;UBERON:0002050!3.00e-07!605;UBERON:0005423!3.00e-07!605;UBERON:0005177!3.69e-07!107;UBERON:0000923!4.72e-07!604;UBERON:0005291!4.72e-07!604;UBERON:0006598!4.72e-07!604;UBERON:0002532!4.72e-07!604;UBERON:0002417!4.96e-07!61;UBERON:0000916!4.96e-07!61;UBERON:0000058!5.20e-07!26;UBERON:0002553!5.88e-07!70;UBERON:0001008!9.38e-07!45;UBERON:0000464!9.46e-07!104;UBERON:0004876!9.57e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.26e-11;33!UBERON:0004571;7.26e-11;33!UBERON:0001637;7.12e-10;42!UBERON:0003509;7.12e-10;42!UBERON:0004572;7.12e-10;42!UBERON:0003914;1.26e-08;74!UBERON:0007500;9.91e-08;56!UBERON:0001981;9.91e-08;56!UBERON:0004537;9.91e-08;56!UBERON:0007625;1.01e-07;11!UBERON:0002049;3.56e-07;75!UBERON:0007798;3.56e-07;75!UBERON:0000055;7.33e-07;65 | |||
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| ||
|short_description=p1@DHRS3 | |short_description=p1@DHRS3 | ||
}} | }} |
Latest revision as of 14:33, 16 September 2015
Short description: | p1@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DHRS3_5end |
Coexpression cluster: | C928_Retinal_Cardiac_mesothelioma_Renal_Meningeal_Smooth_Astrocyte |
Association with transcript: | -384bp_to_NM_004753, uc001auc.2, uc001aud.3, uc009vnm.2_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.07e-20 | 121 |
muscle cell | 1.84e-15 | 55 |
smooth muscle cell | 9.65e-15 | 43 |
smooth muscle myoblast | 9.65e-15 | 43 |
muscle precursor cell | 4.71e-14 | 58 |
myoblast | 4.71e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.71e-14 | 58 |
vascular associated smooth muscle cell | 5.81e-14 | 32 |
electrically responsive cell | 7.98e-13 | 61 |
electrically active cell | 7.98e-13 | 61 |
embryonic cell | 2.08e-11 | 250 |
fat cell | 2.40e-07 | 15 |
lining cell | 5.65e-07 | 58 |
barrier cell | 5.65e-07 | 58 |