FFCP PHASE1:Hg19::chr1:117605017..117605033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:117605017..117605033,+ | |||
|coexpression_cluster_id=C763 | |coexpression_cluster_id=C763 | ||
|description=CAGE_peak_at_chr1:117605017..117605033,+ | |description=CAGE_peak_at_chr1:117605017..117605033,+ | ||
|id=chr1:117605017..117605033,+ | |id=chr1:117605017..117605033,+ | ||
|ontology_enrichment_celltype=CL:0000838!9.26e-12!52;CL:0000542!1.74e-11!53;CL:0000051!1.74e-11!53;CL:0000945!7.96e-11!24;CL:0000826!7.96e-11!24;CL:0002322!3.53e-08!5;CL:0000080!9.89e-08!6;CL:0000988!8.44e-07!182 | |ontology_enrichment_celltype=CL:0000838!9.26e-12!52;CL:0000542!1.74e-11!53;CL:0000051!1.74e-11!53;CL:0000945!7.96e-11!24;CL:0000826!7.96e-11!24;CL:0002322!3.53e-08!5;CL:0000080!9.89e-08!6;CL:0000988!8.44e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.40e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.40e-10,24;CL:0000826,5.40e-10,24;CL:0000838,4.90e-08,52;CL:0000542,6.84e-08,53;CL:0000051,6.84e-08,53;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!4.65e-07!10 | |ontology_enrichment_disease=DOID:0060058!4.65e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.42e-23;10!UBERON:0000178;1.52e-15;15!UBERON:0000179;1.52e-15;15!UBERON:0000463;1.52e-15;15!UBERON:0002390;1.36e-12;32!UBERON:0000478;5.57e-10;24!UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.42e-23,10;UBERON:0000358,6.42e-23,10;UBERON:0000307,6.42e-23,10;UBERON:0000091,6.42e-23,10;UBERON:0000087,6.42e-23,10;UBERON:0007010,6.42e-23,10;UBERON:0007806,6.42e-23,10;UBERON:0008780,6.42e-23,10;UBERON:0005728,6.42e-23,10;UBERON:0000178,1.52e-15,15;UBERON:0000179,1.52e-15,15;UBERON:0000463,1.52e-15,15;UBERON:0000478,5.57e-10,24;UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3 | |||
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|short_description=p@chr1:117605017..117605033,+ | |short_description=p@chr1:117605017..117605033,+ | ||
}} | }} |
Latest revision as of 20:10, 27 July 2015
Short description: | p@chr1:117605017..117605033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:117605017..117605033, + |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.40e-10 | 24 |
pro-B cell | 5.40e-10 | 24 |
lymphoid lineage restricted progenitor cell | 4.90e-08 | 52 |
lymphocyte | 6.84e-08 | 53 |
common lymphoid progenitor | 6.84e-08 | 53 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.42e-23 | 10 |
blastocyst | 6.42e-23 | 10 |
blastula | 6.42e-23 | 10 |
bilaminar disc | 6.42e-23 | 10 |
inner cell mass | 6.42e-23 | 10 |
cleaving embryo | 6.42e-23 | 10 |
connecting stalk | 6.42e-23 | 10 |
inner cell mass derived epiblast | 6.42e-23 | 10 |
extraembryonic mesoderm | 6.42e-23 | 10 |
blood | 1.52e-15 | 15 |
haemolymphatic fluid | 1.52e-15 | 15 |
organism substance | 1.52e-15 | 15 |
extraembryonic structure | 5.57e-10 | 24 |
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |