FFCP PHASE1:Hg19::chr1:113392104..113392115,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=F1T0K1 | |UniProt=F1T0K1 | ||
|association_with_transcript=-406bp_to_AB593135_5end | |association_with_transcript=-406bp_to_AB593135_5end | ||
|cluster_id=chr1:113392104..113392115,+ | |||
|coexpression_cluster_id=C925 | |coexpression_cluster_id=C925 | ||
|description=CAGE_peak_1_at_AB593135_5end | |description=CAGE_peak_1_at_AB593135_5end | ||
|id=chr1:113392104..113392115,+ | |id=chr1:113392104..113392115,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.99e-26!7;CL:0000586!2.99e-26!7;CL:0002322!1.29e-17!5;CL:0002541!1.54e-11!3;CL:0000066!3.10e-09!254 | |ontology_enrichment_celltype=CL:0000039!2.99e-26!7;CL:0000586!2.99e-26!7;CL:0002322!1.29e-17!5;CL:0002541!1.54e-11!3;CL:0000066!3.10e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.69e-78;7!CL:0000586;1.69e-78;7!CL:0002541;4.83e-30;3!CL:0002581;3.67e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.90e-79,7;CL:0000586,8.90e-79,7;CL:0002541,8.74e-30,3;CL:0002581,4.10e-23,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.73e-20;10!UBERON:0005564;1.73e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!1.38e-07!22;DOID:2994!1.38e-07!22 | |ontology_enrichment_disease=DOID:3095!1.38e-07!22;DOID:2994!1.38e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.76e-25;22!DOID:2994;2.76e-25;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.26e-25,22;DOID:2994,2.26e-25,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.54e-11!3;UBERON:0000920!1.54e-11!3;UBERON:0003124!2.48e-08!7;UBERON:0000473!7.78e-08!8 | |ontology_enrichment_uberon=UBERON:0000476!1.54e-11!3;UBERON:0000920!1.54e-11!3;UBERON:0003124!2.48e-08!7;UBERON:0000473!7.78e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.83e-30;3!UBERON:0000920;4.83e-30;3!UBERON:0000473;2.09e-25;8!UBERON:0003135;1.07e-18;11!UBERON:0005406;2.74e-12;2!UBERON:0000991;3.98e-10;21!UBERON:0005631;9.65e-10;10!UBERON:0000158;9.65e-10;10!UBERON:0003101;1.08e-09;22!UBERON:0000079;1.08e-09;22!UBERON:0001052;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.74e-30,3;UBERON:0000473,1.56e-25,8;UBERON:0003135,8.66e-19,11;UBERON:0003124,2.17e-13,7;UBERON:0005406,2.90e-12,2;UBERON:0000991,3.57e-10,21;UBERON:0009196,3.57e-10,21;UBERON:0009117,3.57e-10,21;UBERON:0005564,3.57e-10,21;UBERON:0004176,9.69e-10,22;UBERON:0003101,9.69e-10,22;UBERON:0000079,9.69e-10,22;UBERON:0005631,3.66e-07,14;UBERON:0000158,3.66e-07,14;UBERON:0001052,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,3.76982106521043,2.7161842980502,1.27600463892768,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,1.68163297988273,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,1.87052183685892,3.76769088092864,1.75495277504663,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.243947412259191,0.397589304964456,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,3.76982106521043,2.7161842980502,1.27600463892768,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.275078873194468,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,1.68163297988273,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,1.87052183685892,3.76769088092864,1.75495277504663,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AB593135 | |short_description=p1@AB593135 | ||
}} | }} |
Latest revision as of 05:20, 16 September 2015
Short description: | p1@AB593135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB593135_5end |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | -406bp_to_AB593135_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.90e-79 | 7 |
germ cell | 8.90e-79 | 7 |
chorionic membrane mesenchymal stem cell | 8.74e-30 | 3 |
perirenal preadipocyte | 4.10e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.74e-30 | 3 |
testis | 1.56e-25 | 8 |
male reproductive organ | 8.66e-19 | 11 |
chorion | 2.17e-13 | 7 |
perirenal fat | 2.90e-12 | 2 |
gonad | 3.57e-10 | 21 |
indifferent external genitalia | 3.57e-10 | 21 |
indifferent gonad | 3.57e-10 | 21 |
gonad primordium | 3.57e-10 | 21 |
external genitalia | 9.69e-10 | 22 |
male organism | 9.69e-10 | 22 |
male reproductive system | 9.69e-10 | 22 |
extraembryonic membrane | 3.66e-07 | 14 |
membranous layer | 3.66e-07 | 14 |
rectum | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.26e-25 | 22 |
germ cell cancer | 2.26e-25 | 22 |