FFCP PHASE1:Hg19::chr18:7567336..7567347,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:7567336..7567347,+
|short_description=p5@PTPRM
|description=CAGE_peak_5_at_PTPRM_5end
|association_with_transcript=22bp_to_NM_001105244,NM_002845,uc002knn...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5797 | |EntrezGene=5797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9675 | |HGNC=9675 | ||
|TSSclassifier=strong | |||
|UniProt=A7MBN1,P28827 | |UniProt=A7MBN1,P28827 | ||
|association_with_transcript=22bp_to_NM_001105244,NM_002845,uc002knn.3,uc010dkv.2_5end | |||
|cluster_id=chr18:7567336..7567347,+ | |||
|coexpression_cluster_id=C1805 | |||
|description=CAGE_peak_5_at_PTPRM_5end | |||
|id=chr18:7567336..7567347,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-12!115;UBERON:0000477!9.51e-12!286;UBERON:0004111!1.80e-08!241;UBERON:0000475!5.64e-08!365;UBERON:0000119!1.16e-07!312;UBERON:0000483!2.54e-07!309;UBERON:0000467!8.20e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,3.72e-07,4;UBERON:0007023,6.75e-07,114;UBERON:0003978,9.69e-07,3;UBERON:0009751,9.69e-07,3;UBERON:0000946,9.69e-07,3;UBERON:0002523,9.69e-07,3;UBERON:0005983,9.69e-07,3;UBERON:0002165,9.69e-07,3;UBERON:0002062,9.69e-07,3;UBERON:0007280,9.69e-07,3 | |||
|phase1_expression=0.726713517082227,1.2846031433459,1.26858963686374,0,0.893922188854576,1.74467704820074,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,1.20538905604795,0.730310090387373,0.487932798790507,0.369363174230364,0.204000691244253,0,0.572471974262113,0.410623275218653,0.87879847716362,0.0764134057479513,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,2.43806866313962,0,0.12786256184353,0.722878304769133,1.00267582127178,0.579386075843295,0.795285947051099,1.94653948121054,0.189069634328136,0.443458794925128,0.175669571386252,0.851363990735132,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,1.67799774483962,1.10047216776027,0.626984899610432,0.775250277507987,2.13459757612026,3.68192674041137,0.805658634218294,0.760272105718513,0.488124115096339,1.10298924103761,1.62028389576352,0.625098097988558,0.673588117878509,0.450445921933289,0,0,1.09921046358244,0,0,0,1.49091585508596,0.506522046658319,1.19168262731897,0.573673241497627,0.709336764396714,0,1.06748995729705,0.24666754841716,0.622422070799533,0.134710672069688,0,1.36221684880438,1.15235184896,0.234321431833797,0,0.570471821544449,0,0.469737994575059,0.323745888736263,0,0,0.122834317311768,0.619954687054593,0,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0.831192346452549,1.31693286264251,0.612975591598039,1.35214253015937,0,1.25572744982203,0.213557388818567,0.635795703478686,0.900273288253207,0.309157587715317,1.28820270022815,0.930584281657949,0.675105328965065,0.389748020644795,0.757301322732344,1.01254888506529,0.323292113637624,1.42003837006646,0.302256294682921,0.169560592310488,0,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0.310983165046111,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,3.69077727312324,1.40241773803446,0,0,1.26755034821831,0,0,0,0.860919069801795,0.686271241194102,0.439001141634502,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0.570762456703795,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0,1.52394946301206,1.14596527667483,1.17217447210047,0,1.43958489784653,0.300343057843917,2.00078502841405,0.336393253036082,1.30788020649984,0.36669142910475,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0,0.857867961948885,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0.394061520403854,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.502548796003046,0,0,0,0,0.49076596687656,0,0,1.24782516918484,0.535286966391485,1.26161932027148,1.05427273493442,0.300946099727719,0,0,0,0.553107505625109,0.434418072340414,0,0,0.206768026122887,0,0,0,0,0.604780586659361,1.24053903909388,2.14846762603287,0,1.53766979106841,0,0.804269605718038,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,0.725156697549733,0.200506470303285,0.276242966807689,0.34444334449382,0.182091168006717,0.917870904715969,0.451199612907412,0.462092022626489,0,0,0.211103257785751,0,0.340187410553031,0.431831832204279,1.54227252690289,0.270946437543853,0,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0.256450125116389,0,0.325378394664303,1.23649213977267,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.48335359146061,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0.340906509664404,0.178064071293475,0.826424576804891,0.192190067365106,2.29702882490251,0.6069466851333,0,0.94443704049192,0,0.308033580176089,0,0,0,0.286249773483982,1.48863347743867,0.949138274156178,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.274537029736055,0.589062011728432,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0.7133421029625,0,0.422215270595328,0.329294892959902,0,1.04980416073495,0,0,0,1.03558180854457,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0,0.191505370132367,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0.222886768554957,0,0.23874448473769,0,0,1.9882952955326,0.281338832821026,0.111308705022906,0,0,1.79323189425963,0.552567831062295,0,0,0,0.311039587661807,0,1.43216939740487,0,1.08507746200627,0,0,0.969332746095218,0.463840490809256,0,0,0,5.0749970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| ||
|short_description=p5@PTPRM | |||
}} | }} |
Latest revision as of 18:46, 24 September 2015
Short description: | p5@PTPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPRM_5end |
Coexpression cluster: | C1805_heart_diaphragm_adipose_vagina_ductus_thyroid_mature |
Association with transcript: | 22bp_to_NM_001105244, NM_002845, uc002knn.3, uc010dkv.2_5end |
EntrezGene: | PTPRM |
HGNC: | 9675 |
UniProt: | A7MBN1P28827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 3.72e-07 | 4 |
adult organism | 6.75e-07 | 114 |
valve | 9.69e-07 | 3 |
cardiac mesenchyme | 9.69e-07 | 3 |
cardial valve | 9.69e-07 | 3 |
tunica intima | 9.69e-07 | 3 |
heart layer | 9.69e-07 | 3 |
endocardium | 9.69e-07 | 3 |
endocardial cushion | 9.69e-07 | 3 |
presumptive endocardium | 9.69e-07 | 3 |