FFCP PHASE1:Hg19::chr1:100818396..100818420,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:100818396..100818420,- | |||
|coexpression_cluster_id=C692 | |coexpression_cluster_id=C692 | ||
|description=CAGE_peak_at_chr1:100818396..100818420,- | |description=CAGE_peak_at_chr1:100818396..100818420,- | ||
|id=chr1:100818396..100818420,- | |id=chr1:100818396..100818420,- | ||
|ontology_enrichment_celltype=CL:0000988!7.67e-22!182;CL:0000738!2.04e-21!140;CL:0000037!8.60e-21!172;CL:0000566!8.60e-21!172;CL:0002032!7.06e-18!165;CL:0000837!7.06e-18!165;CL:0000763!6.06e-14!112;CL:0000049!6.06e-14!112;CL:0000766!9.08e-14!76;CL:0000094!1.34e-13!8;CL:0002031!1.46e-12!124;CL:0000081!2.89e-12!11;CL:0002087!1.76e-10!119;CL:0000557!4.23e-09!71;CL:0002057!1.54e-08!42;CL:0000080!1.62e-08!6;CL:0002393!2.99e-08!9;CL:0002397!2.99e-08!9;CL:0000860!1.05e-07!45;CL:0000623!1.07e-07!3;CL:0000825!1.07e-07!3;CL:0000767!2.04e-07!3;CL:0002274!2.19e-07!5;CL:0000457!2.19e-07!5;CL:0002191!2.19e-07!5;CL:0000097!2.19e-07!5;CL:0000831!2.19e-07!5;CL:0002028!2.19e-07!5;CL:0000839!2.85e-07!70;CL:0000842!4.14e-07!3 | |ontology_enrichment_celltype=CL:0000988!7.67e-22!182;CL:0000738!2.04e-21!140;CL:0000037!8.60e-21!172;CL:0000566!8.60e-21!172;CL:0002032!7.06e-18!165;CL:0000837!7.06e-18!165;CL:0000763!6.06e-14!112;CL:0000049!6.06e-14!112;CL:0000766!9.08e-14!76;CL:0000094!1.34e-13!8;CL:0002031!1.46e-12!124;CL:0000081!2.89e-12!11;CL:0002087!1.76e-10!119;CL:0000557!4.23e-09!71;CL:0002057!1.54e-08!42;CL:0000080!1.62e-08!6;CL:0002393!2.99e-08!9;CL:0002397!2.99e-08!9;CL:0000860!1.05e-07!45;CL:0000623!1.07e-07!3;CL:0000825!1.07e-07!3;CL:0000767!2.04e-07!3;CL:0002274!2.19e-07!5;CL:0000457!2.19e-07!5;CL:0002191!2.19e-07!5;CL:0000097!2.19e-07!5;CL:0000831!2.19e-07!5;CL:0002028!2.19e-07!5;CL:0000839!2.85e-07!70;CL:0000842!4.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.30e-35;8!CL:0000081;2.97e-25;11!CL:0000623;1.47e-23;3!CL:0000771;4.71e-17;2!CL:0001014;8.21e-17;2!CL:0001016;8.21e-17;2!CL:0000097;3.33e-15;5!CL:0002393;4.88e-12;6!CL:0002397;4.88e-12;6!CL:0000775;1.61e-11;3!CL:0000767;3.25e-11;3!CL:0000037;6.98e-09;1!CL:0001024;6.98e-09;1!CL:0000163;1.15e-08;9!CL:0000453;3.01e-07;5!CL:0000766;4.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.33e-35,8;CL:0000081,2.98e-25,11;CL:0000623,1.17e-23,3;CL:0000825,1.17e-23,3;CL:0000738,1.46e-23,136;CL:0000037,2.06e-22,168;CL:0000988,4.42e-21,177;CL:0002032,2.18e-19,161;CL:0000837,2.18e-19,161;CL:0000771,4.19e-17,2;CL:0001014,9.26e-17,2;CL:0001016,9.26e-17,2;CL:0000097,3.41e-15,5;CL:0002028,3.41e-15,5;CL:0000763,2.29e-13,108;CL:0000049,2.29e-13,108;CL:0000766,2.51e-13,72;CL:0002031,1.41e-11,120;CL:0000775,1.74e-11,3;CL:0000767,3.25e-11,3;CL:0001024,9.17e-09,1;CL:0000163,1.17e-08,9;CL:0000134,1.54e-08,354;CL:0002320,2.72e-08,361;CL:0002393,3.55e-08,9;CL:0002397,3.55e-08,9;CL:0000034,9.95e-08,441;CL:0000219,2.02e-07,386;CL:0000453,3.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-10!102;UBERON:0003061!1.24e-10!102;UBERON:0002371!2.99e-09!80;UBERON:0001474!5.20e-09!86;UBERON:0002193!5.53e-09!112;UBERON:0004765!9.65e-07!101;UBERON:0001434!9.65e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!1.24e-10!102;UBERON:0003061!1.24e-10!102;UBERON:0002371!2.99e-09!80;UBERON:0001474!5.20e-09!86;UBERON:0002193!5.53e-09!112;UBERON:0004765!9.65e-07!101;UBERON:0001434!9.65e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.91e-08,371;UBERON:0002371,7.66e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0.383829398097213,1.23852898652861,0,0,0,0,0,1.17440175733939,1.10799081706375,1.40381113229099,2.82114131930607,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.612167784741805,0,0,0.989553900560148,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.637812899895131,0.838634582033504,0.112328631146495,0.600707571366025,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,1.32171328579026,1.68152568894461,0,0.590129310341499,0,1.23360899399706,0,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,1.81446068902259,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,7.25648404392702,8.79131715843465,8.45824303956746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.18218456121156,1.72502059887614,3.59360501583295,0,0,0,0,0,2.24702107184155,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.620304078368662,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,2.249738915515,6.1904156364636,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0.383829398097213,1.23852898652861,0,0,0,0,0,1.17440175733939,1.10799081706375,1.40381113229099,2.82114131930607,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.612167784741805,0,0,0.989553900560148,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0.637812899895131,0.838634582033504,0.112328631146495,0.600707571366025,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,1.32171328579026,1.68152568894461,0,0.590129310341499,0,1.23360899399706,0,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,1.81446068902259,1.33720097891754,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,7.25648404392702,8.79131715843465,8.45824303956746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.18218456121156,1.72502059887614,3.59360501583295,0,0,0,0,0,2.24702107184155,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.620304078368662,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,2.249738915515,6.1904156364636,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr1:100818396..100818420,- | |short_description=p@chr1:100818396..100818420,- | ||
}} | }} |
Latest revision as of 18:56, 27 July 2015
Short description: | p@chr1:100818396..100818420, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:100818396..100818420, - |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.33e-35 | 8 |
blood cell | 2.98e-25 | 11 |
natural killer cell | 1.17e-23 | 3 |
pro-NK cell | 1.17e-23 | 3 |
leukocyte | 1.46e-23 | 136 |
hematopoietic stem cell | 2.06e-22 | 168 |
hematopoietic cell | 4.42e-21 | 177 |
hematopoietic oligopotent progenitor cell | 2.18e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-19 | 161 |
eosinophil | 4.19e-17 | 2 |
CD1a-positive Langerhans cell | 9.26e-17 | 2 |
immature CD1a-positive Langerhans cell | 9.26e-17 | 2 |
mast cell | 3.41e-15 | 5 |
basophil mast progenitor cell | 3.41e-15 | 5 |
myeloid cell | 2.29e-13 | 108 |
common myeloid progenitor | 2.29e-13 | 108 |
myeloid leukocyte | 2.51e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.41e-11 | 120 |
neutrophil | 1.74e-11 | 3 |
basophil | 3.25e-11 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.17e-09 | 1 |
endocrine cell | 1.17e-08 | 9 |
mesenchymal cell | 1.54e-08 | 354 |
connective tissue cell | 2.72e-08 | 361 |
intermediate monocyte | 3.55e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.55e-08 | 9 |
stem cell | 9.95e-08 | 441 |
motile cell | 2.02e-07 | 386 |
Langerhans cell | 3.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.91e-08 | 371 |
bone marrow | 7.66e-07 | 76 |