FFCP PHASE1:Hg19::chr19:843564..843580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5657 | |EntrezGene=5657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9495 | |HGNC=9495 | ||
|TSSclassifier=strong | |||
|UniProt=P24158 | |UniProt=P24158 | ||
|association_with_transcript=104bp_to_M29142,X56132_5end | |association_with_transcript=104bp_to_M29142,X56132_5end | ||
|cluster_id=chr19:843564..843580,+ | |||
|coexpression_cluster_id=C209 | |coexpression_cluster_id=C209 | ||
|description=CAGE_peak_2_at_PRTN3_5end | |description=CAGE_peak_2_at_PRTN3_5end | ||
|id=chr19:843564..843580,+ | |id=chr19:843564..843580,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.59e-07!112;CL:0000049!1.59e-07!112 | |ontology_enrichment_celltype=CL:0000763!1.59e-07!112;CL:0000049!1.59e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000037;2.07e-11;1!CL:0001024;2.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.97e-11,1;CL:0000763,1.99e-11,108;CL:0000049,1.99e-11,108;CL:0000037,5.14e-08,168;CL:0000988,1.67e-07,177;CL:0002032,4.47e-07,161;CL:0000837,4.47e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.67e-11;1 | |||
|ontology_enrichment_disease=DOID:8692!1.40e-25!31;DOID:1240!1.17e-19!39;DOID:2531!2.85e-14!51;DOID:0060083!2.85e-14!51 | |ontology_enrichment_disease=DOID:8692!1.40e-25!31;DOID:1240!1.17e-19!39;DOID:2531!2.85e-14!51;DOID:0060083!2.85e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.15e-43;31!DOID:1240;4.18e-26;39!DOID:2531;1.53e-16;51!DOID:0060083;1.53e-16;51!DOID:225;1.37e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.17e-44,31;DOID:1240,3.73e-35,39;DOID:2531,1.76e-26,51;DOID:0060083,1.76e-26,51;DOID:225,1.31e-11,1;DOID:0050686,1.24e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001950!3.35e-11!20;UBERON:0001869!1.31e-10!32;UBERON:0002791!3.04e-10!33;UBERON:0002619!4.01e-10!22;UBERON:0004177!5.52e-10!7;UBERON:0002020!6.72e-10!34;UBERON:0003528!6.72e-10!34;UBERON:0001893!6.72e-10!34;UBERON:0002780!1.07e-09!41;UBERON:0001890!1.07e-09!41;UBERON:0006240!1.07e-09!41;UBERON:0003080!2.01e-09!42;UBERON:0000956!8.10e-09!25;UBERON:0000203!8.10e-09!25;UBERON:0007023!1.50e-07!115;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69 | |ontology_enrichment_uberon=UBERON:0001950!3.35e-11!20;UBERON:0001869!1.31e-10!32;UBERON:0002791!3.04e-10!33;UBERON:0002619!4.01e-10!22;UBERON:0004177!5.52e-10!7;UBERON:0002020!6.72e-10!34;UBERON:0003528!6.72e-10!34;UBERON:0001893!6.72e-10!34;UBERON:0002780!1.07e-09!41;UBERON:0001890!1.07e-09!41;UBERON:0006240!1.07e-09!41;UBERON:0003080!2.01e-09!42;UBERON:0000956!8.10e-09!25;UBERON:0000203!8.10e-09!25;UBERON:0007023!1.50e-07!115;UBERON:0000955!3.94e-07!69;UBERON:0006238!3.94e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;4.67e-11;1!UBERON:0002082;4.67e-11;1!UBERON:0004177;1.04e-08;5!UBERON:0005057;1.04e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,4.91e-11,1;UBERON:0002082,4.91e-11,1;UBERON:0010226,4.91e-11,1 | |||
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| ||
|short_description=p2@PRTN3 | |short_description=p2@PRTN3 | ||
}} | }} |
Latest revision as of 00:00, 25 September 2015
Short description: | p2@PRTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRTN3_5end |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | 104bp_to_M29142, X56132_5end |
EntrezGene: | PRTN3 |
HGNC: | 9495 |
UniProt: | P24158 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.97e-11 | 1 |
myeloid cell | 1.99e-11 | 108 |
common myeloid progenitor | 1.99e-11 | 108 |
hematopoietic stem cell | 5.14e-08 | 168 |
hematopoietic cell | 1.67e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.47e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.47e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 4.91e-11 | 1 |
cardiac ventricle | 4.91e-11 | 1 |
future cardiac ventricle | 4.91e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.17e-44 | 31 |
leukemia | 3.73e-35 | 39 |
hematologic cancer | 1.76e-26 | 51 |
immune system cancer | 1.76e-26 | 51 |
syndrome | 1.31e-11 | 1 |
organ system cancer | 1.24e-08 | 137 |