FFCP PHASE1:Hg19::chr19:48901921..48901935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48901921..48901935,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr19:48901921..48901935,- | |description=CAGE_peak_at_chr19:48901921..48901935,- | ||
|id=chr19:48901921..48901935,- | |id=chr19:48901921..48901935,- | ||
|ontology_enrichment_celltype=CL:0002322!2.32e-08!5 | |ontology_enrichment_celltype=CL:0002322!2.32e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.91e-19;1!CL:0000164;3.91e-19;1!CL:0000502;3.91e-19;1!CL:0000172;3.91e-19;1!CL:0000173;3.91e-19;1!CL:0000346;2.97e-07;3!CL:1000428;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,4.69e-19,1;CL:0000164,4.69e-19,1;CL:0000502,4.69e-19,1;CL:0000172,4.69e-19,1;CL:0000173,4.69e-19,1;CL:0002351,4.69e-19,1;CL:0000346,2.79e-07,3;CL:1000428,2.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;3.91e-19;1!UBERON:0009117;2.62e-08;10!UBERON:0005564;2.62e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!6.16e-20!143;DOID:162!4.38e-16!235;DOID:14566!5.69e-16!239;DOID:305!9.14e-14!106;DOID:3119!1.05e-07!14 | |ontology_enrichment_disease=DOID:0050687!6.16e-20!143;DOID:162!4.38e-16!235;DOID:14566!5.69e-16!239;DOID:305!9.14e-14!106;DOID:3119!1.05e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4430;3.91e-19;1!DOID:3307;1.89e-10;2!DOID:171;3.83e-08;10!DOID:3095;5.20e-08;22!DOID:2994;5.20e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.69e-19,1;DOID:3307,1.89e-10,2;DOID:171,3.90e-08,10;DOID:3095,5.26e-08,22;DOID:2994,5.26e-08,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.68e-10;8!UBERON:0003135;1.24e-07;11!UBERON:0000412;2.97e-07;3!UBERON:0001992;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.68e-10,8;UBERON:0003135,1.24e-07,11;UBERON:0000412,2.79e-07,3;UBERON:0001992,2.79e-07,3 | |||
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| ||
|short_description=p@chr19:48901921..48901935,- | |short_description=p@chr19:48901921..48901935,- | ||
}} | }} |
Latest revision as of 15:42, 27 July 2015
Short description: | p@chr19:48901921..48901935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48901921..48901935, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 4.69e-19 | 1 |
enteroendocrine cell | 4.69e-19 | 1 |
type D enteroendocrine cell | 4.69e-19 | 1 |
somatostatin secreting cell | 4.69e-19 | 1 |
pancreatic D cell | 4.69e-19 | 1 |
progenitor cell of endocrine pancreas | 4.69e-19 | 1 |
hair follicle dermal papilla cell | 2.79e-07 | 3 |
stem cell of epidermis | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.68e-10 | 8 |
male reproductive organ | 1.24e-07 | 11 |
dermal papilla | 2.79e-07 | 3 |
papillary layer of dermis | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.69e-19 | 1 |
teratoma | 1.89e-10 | 2 |
neuroectodermal tumor | 3.90e-08 | 10 |
germ cell and embryonal cancer | 5.26e-08 | 22 |
germ cell cancer | 5.26e-08 | 22 |