FFCP PHASE1:Hg19::chr18:71843121..71843138,+: Difference between revisions
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|id=chr18:71843121..71843138,+
|short_description=p@chr18:71843121..71843138,+
|description=CAGE_peak_at_chr18:71843121..71843138,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:71843121..71843138,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr18:71843121..71843138,+ | |||
|id=chr18:71843121..71843138,+ | |||
|ontology_enrichment_celltype=CL:0002553!2.42e-50!1;CL:0000082!1.72e-11!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.34e-66;1!CL:0000082;5.66e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.39e-66,1;CL:0000082,5.66e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.24e-10;29!UBERON:0001041;6.52e-10;30 | |||
|ontology_enrichment_disease=DOID:1324!2.94e-14!15;DOID:5409!1.13e-13!4;DOID:0050615!1.95e-13!16;DOID:1325!2.18e-08!7;DOID:3904!2.18e-08!7;DOID:3905!8.37e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.24e-18;15!DOID:5409;9.45e-18;4!DOID:0050615;1.51e-17;16!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7!DOID:3905;1.16e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.24e-18,15;DOID:5409,1.03e-17,4;DOID:0050615,1.51e-17,16;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0005153!6.49e-13!37;UBERON:0004802!1.72e-11!19;UBERON:0000115!1.72e-11!19;UBERON:0002048!4.53e-10!22;UBERON:0000117!4.53e-10!22;UBERON:0000171!4.53e-10!22;UBERON:0000170!4.53e-10!22;UBERON:0005597!4.53e-10!22;UBERON:0000118!4.53e-10!22;UBERON:0005157!1.28e-09!51;UBERON:0004807!3.92e-08!28;UBERON:0005178!7.16e-07!34;UBERON:0002224!7.16e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;5.66e-15;19!UBERON:0000115;5.66e-15;19!UBERON:0002048;4.26e-13;22!UBERON:0004807;4.26e-13;22!UBERON:0000117;4.26e-13;22!UBERON:0000171;4.26e-13;22!UBERON:0000170;4.26e-13;22!UBERON:0000072;2.91e-09;37!UBERON:0005181;2.91e-09;35!UBERON:0005911;1.30e-08;36!UBERON:0005178;5.80e-08;34!UBERON:0002224;5.80e-08;34!UBERON:0000065;4.59e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.66e-15,19;UBERON:0000115,5.66e-15,19;UBERON:0002048,4.26e-13,22;UBERON:0000117,4.26e-13,22;UBERON:0000171,4.26e-13,22;UBERON:0000170,4.26e-13,22;UBERON:0005597,4.26e-13,22;UBERON:0000118,4.26e-13,22;UBERON:0004807,1.54e-10,28;UBERON:0005178,7.08e-09,34;UBERON:0002224,7.08e-09,34;UBERON:0005181,1.18e-08,35;UBERON:0005153,3.03e-08,37;UBERON:0008947,4.68e-08,38;UBERON:0003258,4.68e-08,38 | |||
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|short_description=p@chr18:71843121..71843138,+ | |||
}} | }} |
Latest revision as of 02:06, 26 July 2015
Short description: | p@chr18:71843121..71843138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:71843121..71843138, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.39e-66 | 1 |
epithelial cell of lung | 5.66e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.66e-15 | 19 |
lung epithelium | 5.66e-15 | 19 |
lung | 4.26e-13 | 22 |
respiratory tube | 4.26e-13 | 22 |
respiration organ | 4.26e-13 | 22 |
pair of lungs | 4.26e-13 | 22 |
lung primordium | 4.26e-13 | 22 |
lung bud | 4.26e-13 | 22 |
respiratory system epithelium | 1.54e-10 | 28 |
thoracic cavity element | 7.08e-09 | 34 |
thoracic cavity | 7.08e-09 | 34 |
thoracic segment organ | 1.18e-08 | 35 |
epithelial bud | 3.03e-08 | 37 |
respiratory primordium | 4.68e-08 | 38 |
endoderm of foregut | 4.68e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.24e-18 | 15 |
lung small cell carcinoma | 1.03e-17 | 4 |
respiratory system cancer | 1.51e-17 | 16 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |