FFCP PHASE1:Hg19::chr19:18392422..18392440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3727 | |EntrezGene=3727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6206 | |HGNC=6206 | ||
|TSSclassifier=strong | |||
|UniProt=P17535 | |UniProt=P17535 | ||
|association_with_transcript=0bp_to_ENST00000252818,NM_005354,uc002nip.2_5end | |association_with_transcript=0bp_to_ENST00000252818,NM_005354,uc002nip.2_5end | ||
|cluster_id=chr19:18392422..18392440,- | |||
|coexpression_cluster_id=C922 | |coexpression_cluster_id=C922 | ||
|description=CAGE_peak_1_at_JUND_5end | |description=CAGE_peak_1_at_JUND_5end | ||
|id=chr19:18392422..18392440,- | |id=chr19:18392422..18392440,- | ||
|ontology_enrichment_celltype=CL:0002057!7.53e-17!42;CL:0000738!1.31e-15!140;CL:0000988!2.26e-14!182;CL:0000860!5.21e-14!45;CL:0000037!4.66e-13!172;CL:0000566!4.66e-13!172;CL:0002031!4.81e-11!124;CL:0002032!5.44e-11!165;CL:0000837!5.44e-11!165;CL:0002087!2.60e-10!119;CL:0000766!1.06e-09!76;CL:0000557!1.08e-07!71;CL:0000763!3.76e-07!112;CL:0000049!3.76e-07!112 | |ontology_enrichment_celltype=CL:0002057!7.53e-17!42;CL:0000738!1.31e-15!140;CL:0000988!2.26e-14!182;CL:0000860!5.21e-14!45;CL:0000037!4.66e-13!172;CL:0000566!4.66e-13!172;CL:0002031!4.81e-11!124;CL:0002032!5.44e-11!165;CL:0000837!5.44e-11!165;CL:0002087!2.60e-10!119;CL:0000766!1.06e-09!76;CL:0000557!1.08e-07!71;CL:0000763!3.76e-07!112;CL:0000049!3.76e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-11;33!CL:0002057;1.26e-11;33!CL:0000576;1.82e-07;48!CL:0000473;6.83e-07;39!CL:0000234;6.83e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.91e-17,136;CL:0000860,7.53e-17,42;CL:0002057,7.53e-17,42;CL:0000988,5.29e-16,177;CL:0000037,2.30e-14,168;CL:0002031,1.83e-12,120;CL:0000473,2.08e-12,48;CL:0000234,2.08e-12,48;CL:0002032,3.44e-12,161;CL:0000837,3.44e-12,161;CL:0002087,1.06e-11,115;CL:0000766,1.80e-11,72;CL:0000557,2.89e-09,67;CL:0000763,2.82e-08,108;CL:0000049,2.82e-08,108;CL:0000839,6.06e-08,66;CL:0002009,7.32e-08,61;CL:0002194,4.37e-07,59;CL:0000576,4.37e-07,59;CL:0000040,4.37e-07,59;CL:0000559,4.37e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-11!115;UBERON:0002390!4.67e-11!102;UBERON:0003061!4.67e-11!102;UBERON:0002193!5.79e-10!112;UBERON:0002371!2.98e-07!80;UBERON:0002405!9.45e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.02e-11!115;UBERON:0002390!4.67e-11!102;UBERON:0003061!4.67e-11!102;UBERON:0002193!5.79e-10!112;UBERON:0002371!2.98e-07!80;UBERON:0002405!9.45e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-12,98;UBERON:0003061,1.17e-12,98;UBERON:0007023,1.11e-11,114;UBERON:0002193,2.26e-11,108;UBERON:0002371,1.20e-08,76;UBERON:0001474,5.49e-08,82;UBERON:0002405,7.10e-08,93;UBERON:0004765,2.20e-07,90 | |||
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201.058545804025,191.813925292248,83.3478079988406 | ||
|short_description=p1@JUND | |short_description=p1@JUND | ||
}} | }} |
Latest revision as of 15:21, 16 September 2015
Short description: | p1@JUND |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JUND_5end |
Coexpression cluster: | C922_Mast_Eosinophils_mature_Basophils_CD19_CD4_Natural |
Association with transcript: | 0bp_to_ENST00000252818, NM_005354, uc002nip.2_5end |
EntrezGene: | JUND |
HGNC: | 6206 |
UniProt: | P17535 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.91e-17 | 136 |
classical monocyte | 7.53e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.53e-17 | 42 |
hematopoietic cell | 5.29e-16 | 177 |
hematopoietic stem cell | 2.30e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 1.83e-12 | 120 |
defensive cell | 2.08e-12 | 48 |
phagocyte | 2.08e-12 | 48 |
hematopoietic oligopotent progenitor cell | 3.44e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-12 | 161 |
nongranular leukocyte | 1.06e-11 | 115 |
myeloid leukocyte | 1.80e-11 | 72 |
granulocyte monocyte progenitor cell | 2.89e-09 | 67 |
myeloid cell | 2.82e-08 | 108 |
common myeloid progenitor | 2.82e-08 | 108 |
myeloid lineage restricted progenitor cell | 6.06e-08 | 66 |
macrophage dendritic cell progenitor | 7.32e-08 | 61 |
monopoietic cell | 4.37e-07 | 59 |
monocyte | 4.37e-07 | 59 |
monoblast | 4.37e-07 | 59 |
promonocyte | 4.37e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-12 | 98 |
blood island | 1.17e-12 | 98 |
adult organism | 1.11e-11 | 114 |
hemolymphoid system | 2.26e-11 | 108 |
bone marrow | 1.20e-08 | 76 |
bone element | 5.49e-08 | 82 |
immune system | 7.10e-08 | 93 |
skeletal element | 2.20e-07 | 90 |