FFCP PHASE1:Hg19::chr19:18209729..18209742,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3594 | |EntrezGene=3594 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5971 | |HGNC=5971 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_uc002nhx.1_5end | |association_with_transcript=-103bp_to_uc002nhx.1_5end | ||
|cluster_id=chr19:18209729..18209742,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_3_at_IL12RB1_5end | |description=CAGE_peak_3_at_IL12RB1_5end | ||
|id=chr19:18209729..18209742,- | |id=chr19:18209729..18209742,- | ||
|ontology_enrichment_celltype=CL:0000945!4.72e-79!24;CL:0000826!4.72e-79!24;CL:0000236!2.84e-48!14;CL:0000542!6.43e-36!53;CL:0000051!6.43e-36!53;CL:0000838!2.01e-33!52;CL:0002087!2.15e-23!119;CL:0000738!4.23e-22!140;CL:0002031!2.44e-17!124;CL:0000037!1.36e-16!172;CL:0000566!1.36e-16!172;CL:0000988!2.86e-15!182;CL:0000784!2.34e-13!3;CL:0002032!1.43e-12!165;CL:0000837!1.43e-12!165;CL:0000785!2.53e-09!2;CL:0000955!2.53e-09!2;CL:0000818!2.53e-09!2;CL:0000954!2.53e-09!2;CL:0000816!2.53e-09!2 | |ontology_enrichment_celltype=CL:0000945!4.72e-79!24;CL:0000826!4.72e-79!24;CL:0000236!2.84e-48!14;CL:0000542!6.43e-36!53;CL:0000051!6.43e-36!53;CL:0000838!2.01e-33!52;CL:0002087!2.15e-23!119;CL:0000738!4.23e-22!140;CL:0002031!2.44e-17!124;CL:0000037!1.36e-16!172;CL:0000566!1.36e-16!172;CL:0000988!2.86e-15!182;CL:0000784!2.34e-13!3;CL:0002032!1.43e-12!165;CL:0000837!1.43e-12!165;CL:0000785!2.53e-09!2;CL:0000955!2.53e-09!2;CL:0000818!2.53e-09!2;CL:0000954!2.53e-09!2;CL:0000816!2.53e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.09e-108;24!CL:0000236;2.57e-80;13!CL:0000542;1.40e-33;53!CL:0000784;4.84e-23;3!CL:0000946;7.74e-09;1!CL:0000786;7.74e-09;1!CL:0000785;1.65e-08;1!CL:0000819;1.65e-08;1!CL:0002087;1.64e-07;104!CL:0000738;4.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.43e-108,24;CL:0000826,4.43e-108,24;CL:0000236,2.70e-87,14;CL:0000542,2.73e-52,53;CL:0000051,2.73e-52,53;CL:0000838,4.32e-48,52;CL:0000738,1.05e-24,136;CL:0002087,1.93e-24,115;CL:0000784,5.23e-23,3;CL:0002031,6.08e-21,120;CL:0000037,2.87e-19,168;CL:0000988,4.33e-18,177;CL:0002032,2.03e-16,161;CL:0000837,2.03e-16,161;CL:0000785,1.15e-15,2;CL:0000955,1.15e-15,2;CL:0000818,1.15e-15,2;CL:0000954,1.15e-15,2;CL:0000816,1.15e-15,2;CL:0000817,9.35e-11,3;CL:0000946,5.28e-09,1;CL:0000786,5.28e-09,1;CL:0000980,5.28e-09,1;CL:0000819,2.22e-08,1;CL:0000134,5.43e-07,354;CL:0002320,8.97e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-33;53!CL:0000954;1.23e-15;2!UBERON:0001045;4.18e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.77e-14!10 | |ontology_enrichment_disease=DOID:0060058!2.77e-14!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.35e-12;10!DOID:630;7.74e-09;1!DOID:0050177;7.74e-09;1!DOID:0050427;7.74e-09;1!DOID:0060073;1.65e-08;1!DOID:8675;1.65e-08;1!DOID:12603;1.65e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.49e-12,10;DOID:630,6.65e-09,1;DOID:0050177,6.65e-09,1;DOID:0050427,6.65e-09,1;DOID:12603,2.06e-08,1;DOID:0060073,2.22e-08,1;DOID:8675,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.80e-13!7;UBERON:0002106!2.15e-12!3;UBERON:0004854!2.15e-12!3;UBERON:0009034!2.15e-12!3;UBERON:0002095!2.15e-12!3;UBERON:0004782!2.15e-12!3;UBERON:0003281!2.15e-12!3;UBERON:0009664!2.15e-12!3;UBERON:0002296!2.15e-12!3;UBERON:0005602!2.15e-12!3;UBERON:0001179!2.15e-12!3;UBERON:0006293!2.15e-12!3 | |ontology_enrichment_uberon=UBERON:0004177!1.80e-13!7;UBERON:0002106!2.15e-12!3;UBERON:0004854!2.15e-12!3;UBERON:0009034!2.15e-12!3;UBERON:0002095!2.15e-12!3;UBERON:0004782!2.15e-12!3;UBERON:0003281!2.15e-12!3;UBERON:0009664!2.15e-12!3;UBERON:0002296!2.15e-12!3;UBERON:0005602!2.15e-12!3;UBERON:0001179!2.15e-12!3;UBERON:0006293!2.15e-12!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.18e-09;1!UBERON:0001154;4.18e-09;1!UBERON:0001153;4.18e-09;1!UBERON:0009854;4.18e-09;1!UBERON:0001961;4.18e-09;1!UBERON:0001744;4.18e-09;1!UBERON:0001042;4.18e-09;1!UBERON:0001735;4.18e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.52e-09,1;UBERON:0001153,4.52e-09,1;UBERON:0001045,4.52e-09,1;UBERON:0002372,4.89e-09,1;UBERON:0001961,4.89e-09,1;UBERON:0001744,4.89e-09,1;UBERON:0001735,4.89e-09,1 | |||
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| ||
|short_description=p3@IL12RB1 | |short_description=p3@IL12RB1 | ||
}} | }} |
Latest revision as of 13:49, 16 September 2015
Short description: | p3@IL12RB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL12RB1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -103bp_to_uc002nhx.1_5end |
EntrezGene: | IL12RB1 |
HGNC: | 5971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.43e-108 | 24 |
pro-B cell | 4.43e-108 | 24 |
B cell | 2.70e-87 | 14 |
lymphocyte | 2.73e-52 | 53 |
common lymphoid progenitor | 2.73e-52 | 53 |
lymphoid lineage restricted progenitor cell | 4.32e-48 | 52 |
leukocyte | 1.05e-24 | 136 |
nongranular leukocyte | 1.93e-24 | 115 |
plasmacytoid dendritic cell | 5.23e-23 | 3 |
hematopoietic lineage restricted progenitor cell | 6.08e-21 | 120 |
hematopoietic stem cell | 2.87e-19 | 168 |
hematopoietic cell | 4.33e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.03e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-16 | 161 |
mature B cell | 1.15e-15 | 2 |
pre-B-II cell | 1.15e-15 | 2 |
transitional stage B cell | 1.15e-15 | 2 |
small pre-B-II cell | 1.15e-15 | 2 |
immature B cell | 1.15e-15 | 2 |
precursor B cell | 9.35e-11 | 3 |
antibody secreting cell | 5.28e-09 | 1 |
plasma cell | 5.28e-09 | 1 |
plasmablast | 5.28e-09 | 1 |
B-1 B cell | 2.22e-08 | 1 |
mesenchymal cell | 5.43e-07 | 354 |
connective tissue cell | 8.97e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.52e-09 | 1 |
caecum | 4.52e-09 | 1 |
midgut | 4.52e-09 | 1 |
tonsil | 4.89e-09 | 1 |
mucosa-associated lymphoid tissue | 4.89e-09 | 1 |
lymphoid tissue | 4.89e-09 | 1 |
tonsillar ring | 4.89e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.49e-12 | 10 |
genetic disease | 6.65e-09 | 1 |
monogenic disease | 6.65e-09 | 1 |
xeroderma pigmentosum | 6.65e-09 | 1 |
acute leukemia | 2.06e-08 | 1 |
lymphatic system cancer | 2.22e-08 | 1 |
lymphosarcoma | 2.22e-08 | 1 |